Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68343 | Canola | cytosol | 79.44 | 93.41 |
| CDY25787 | Canola | mitochondrion, peroxisome | 77.57 | 91.71 |
| CDY54291 | Canola | mitochondrion, peroxisome | 77.57 | 91.71 |
| CDY11588 | Canola | mitochondrion, peroxisome | 77.57 | 91.71 |
| CDY09441 | Canola | mitochondrion, peroxisome | 77.57 | 91.71 |
| CDY04706 | Canola | mitochondrion, peroxisome | 77.57 | 91.71 |
| CDY47137 | Canola | peroxisome | 77.57 | 91.71 |
| CDY03747 | Canola | mitochondrion, peroxisome | 77.57 | 91.71 |
| CDY44152 | Canola | mitochondrion, peroxisome | 77.57 | 91.71 |
| CDY41444 | Canola | mitochondrion | 77.1 | 91.16 |
| CDX91717 | Canola | mitochondrion | 77.1 | 91.16 |
| CDX93979 | Canola | mitochondrion, peroxisome | 76.64 | 90.61 |
| CDX89139 | Canola | cytosol | 76.64 | 90.61 |
| CDY27506 | Canola | cytosol | 76.64 | 90.61 |
| CDX80083 | Canola | cytosol | 76.64 | 90.61 |
| CDY51415 | Canola | cytosol | 76.64 | 90.61 |
| CDY37791 | Canola | cytosol | 76.64 | 90.61 |
| VIT_14s0066g01080.t01 | Wine grape | mitochondrion | 76.64 | 90.61 |
| TraesCS2A01G235500.1 | Wheat | golgi, plastid | 76.17 | 90.06 |
| PGSC0003DMT400003226 | Potato | mitochondrion | 76.17 | 90.06 |
| CDY53050 | Canola | cytosol | 76.17 | 90.06 |
| CDY47221 | Canola | mitochondrion | 76.17 | 90.06 |
| GSMUA_Achr2P11590_001 | Banana | mitochondrion | 76.17 | 90.06 |
| Os03t0811900-01 | Rice | plasma membrane | 75.7 | 89.5 |
| Os07t0223100-01 | Rice | plasma membrane | 75.7 | 89.5 |
| Os07t0223400-01 | Rice | mitochondrion | 75.7 | 89.5 |
| EER93218 | Sorghum | mitochondrion | 75.7 | 89.5 |
| EER96075 | Sorghum | mitochondrion | 75.7 | 89.5 |
| TraesCS2D01G244900.1 | Wheat | mitochondrion, peroxisome | 75.7 | 89.5 |
| GSMUA_Achr10P... | Banana | cytosol | 69.16 | 89.16 |
| GSMUA_Achr7P18350_001 | Banana | cytosol | 68.69 | 88.55 |
| Zm00001d005231_P006 | Maize | cytosol | 76.17 | 87.63 |
| CDX95712 | Canola | cytosol | 77.57 | 87.37 |
| KRH36902 | Soybean | endoplasmic reticulum | 74.77 | 86.96 |
| CDX83340 | Canola | cytosol | 77.1 | 86.39 |
| Zm00001d023657_P001 | Maize | cytosol | 18.69 | 85.11 |
| CDX75849 | Canola | cytosol | 45.33 | 84.35 |
| GSMUA_Achr11P... | Banana | cytosol | 76.64 | 82.0 |
| Zm00001d019191_P007 | Maize | peroxisome | 75.7 | 81.41 |
| CDX69567 | Canola | mitochondrion | 78.04 | 81.07 |
| Zm00001d013007_P001 | Maize | plastid | 75.7 | 79.8 |
| CDY09875 | Canola | mitochondrion | 77.1 | 77.46 |
| TraesCS5A01G467400.1 | Wheat | cytosol | 75.7 | 76.78 |
| TraesCS5D01G480200.1 | Wheat | unclear | 75.7 | 76.78 |
| TraesCS5B01G479100.1 | Wheat | golgi | 75.7 | 76.78 |
| HORVU5Hr1G111500.2 | Barley | mitochondrion | 76.64 | 70.09 |
| GSMUA_Achr3P18390_001 | Banana | plasma membrane | 76.64 | 67.77 |
| Zm00001d012537_P003 | Maize | cytosol | 58.41 | 61.58 |
| CDY48224 | Canola | mitochondrion | 56.07 | 58.54 |
| CDX71216 | Canola | mitochondrion | 56.07 | 57.42 |
| CDX68781 | Canola | cytosol | 48.6 | 57.14 |
| CDX75192 | Canola | cytosol | 48.6 | 57.14 |
| CDY45596 | Canola | cytosol | 48.13 | 56.59 |
| CDX76793 | Canola | cytosol | 48.13 | 56.59 |
| CDY34756 | Canola | cytosol | 48.13 | 56.59 |
| CDY36172 | Canola | cytosol | 46.73 | 54.95 |
| CDY43149 | Canola | cytosol | 48.6 | 54.17 |
| CDY28739 | Canola | cytosol | 48.6 | 54.17 |
| CDY23463 | Canola | cytosol | 48.13 | 53.65 |
| CDX69406 | Canola | cytosol | 47.66 | 53.12 |
| CDY16963 | Canola | cytosol | 47.66 | 53.12 |
| GSMUA_Achr6P08570_001 | Banana | cytosol | 76.64 | 51.09 |
| CDY29751 | Canola | cytosol | 42.99 | 50.27 |
| CDY36874 | Canola | cytosol | 42.99 | 50.27 |
| CDY16265 | Canola | cytosol | 42.99 | 50.27 |
| CDY53727 | Canola | cytosol | 42.99 | 50.27 |
| CDY29231 | Canola | cytosol | 36.92 | 42.7 |
| CDY36479 | Canola | cytosol | 36.92 | 42.7 |
| CDY25962 | Canola | mitochondrion | 44.86 | 34.66 |
| CDY38908 | Canola | cytosol | 31.31 | 32.68 |
| CDY13039 | Canola | cytosol | 36.92 | 32.24 |
| CDY31913 | Canola | cytosol | 30.84 | 32.04 |
| CDY00519 | Canola | cytosol | 30.84 | 32.04 |
| CDY32591 | Canola | cytosol | 31.31 | 26.48 |
Protein Annotations
| MapMan:22.3.2.1 | Gene3D:3.40.50.300 | GO:A0A078GAP5 | UniProt:A0A078GAP5 | EnsemblPlants:CDY23500 | ProteinID:CDY23500 |
| ProteinID:CDY23500.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00022134001 | InterPro:IPR024156 | InterPro:P-loop_NTPase | PFAM:PF00025 | PRINTS:PR00328 |
| PFscan:PS51417 | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF182 | SMART:SM00175 | SMART:SM00177 | SMART:SM00178 |
| SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR | TIGRFAMs:TIGR00231 | UniParc:UPI0004EE2E9B |
Description
BnaC06g24690DBnaC06g24690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GAP5]
Coordinates
chrLK032144:+:206392..208674
Molecular Weight (calculated)
24415.3 Da
IEP (calculated)
7.699
GRAVY (calculated)
-0.226
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLGFAKLVS SLFAKKEMRL LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYRN ISFTVWDIGG QDKLRPLWKY YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRI LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTSA TSGQGLYEGL EWLSNNIGGK RLRWIFSGSY RQSSLHCAFL
201: NLSCHQNHPE LHDV
101: VEARDELHRI LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTSA TSGQGLYEGL EWLSNNIGGK RLRWIFSGSY RQSSLHCAFL
201: NLSCHQNHPE LHDV
001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIAGK A
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIAGK A
Arabidopsis Description
ARF2-AADP-ribosylation factor 2-B [Source:UniProtKB/Swiss-Prot;Acc:P0DH91]
SUBAcon: [mitochondrion,peroxisome]
SUBAcon: [mitochondrion,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.