Factsheet for Zm00001d005231_P006

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 4
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d023657_P001	Maize	cytosol	25.27	100.0
AT2G47170.2	Thale cress	mitochondrion	95.16	97.79
KRH56584	Soybean	mitochondrion	94.62	97.24
KRG93262	Soybean	nucleus	94.62	97.24
Bra016344.1-P	Field mustard	mitochondrion	94.62	97.24
AT1G10630.2	Thale cress	mitochondrion	94.62	97.24
CDX91717	Canola	mitochondrion	94.62	97.24
CDY41444	Canola	mitochondrion	94.62	97.24
AT1G23490.1	Thale cress	mitochondrion, peroxisome	94.09	96.69
PGSC0003DMT400003226	Potato	mitochondrion	94.09	96.69
CDY54291	Canola	mitochondrion, peroxisome	94.09	96.69
CDY44152	Canola	mitochondrion, peroxisome	94.09	96.69
CDY25787	Canola	mitochondrion, peroxisome	94.09	96.69
CDY11588	Canola	mitochondrion, peroxisome	94.09	96.69
CDY09441	Canola	mitochondrion, peroxisome	94.09	96.69
CDY04706	Canola	mitochondrion, peroxisome	94.09	96.69
CDY03747	Canola	mitochondrion, peroxisome	94.09	96.69
AT1G70490.4	Thale cress	mitochondrion, peroxisome	94.09	96.69
CDY47137	Canola	peroxisome	93.55	96.13
Zm00001d008295_P002	Maize	plastid	93.55	96.13
Bra024604.1-P	Field mustard	mitochondrion	93.55	96.13
Zm00001d043113_P001	Maize	plastid	94.09	95.63
VIT_14s0066g01080.t01	Wine grape	mitochondrion	93.01	95.58
GSMUA_Achr10P...	Banana	cytosol	84.41	94.58
Zm00001d038533_P001	Maize	plastid	93.01	94.02
Bra012376.1-P	Field mustard	cytosol	94.62	93.62
KRH36902	Soybean	endoplasmic reticulum	90.86	91.85
Zm00001d019191_P007	Maize	peroxisome	96.77	90.45
CDX68343	Canola	cytosol	88.17	90.11
Bra003954.1-P	Field mustard	cytosol	87.1	89.5
GSMUA_Achr11P...	Banana	cytosol	95.16	88.5
Zm00001d013007_P001	Maize	plastid	95.16	87.19
TraesCS5B01G479100.1	Wheat	golgi	95.16	83.89
CDY23500	Canola	cytosol	87.63	76.17
HORVU5Hr1G111500.2	Barley	mitochondrion	95.7	76.07
GSMUA_Achr3P18390_001	Banana	plasma membrane	95.16	73.14
Zm00001d012537_P003	Maize	cytosol	74.73	68.47
Zm00001d017650_P002	Maize	cytosol	54.84	57.3
Zm00001d030157_P001	Maize	extracellular	58.6	56.19
Zm00001d051546_P001	Maize	cytosol	56.45	54.12
Zm00001d052978_P001	Maize	extracellular	50.54	51.09
Zm00001d015121_P002	Maize	mitochondrion	53.23	51.03
Zm00001d044868_P001	Maize	cytosol	50.54	49.74
Zm00001d017717_P001	Maize	cytosol	56.45	47.51
Zm00001d033414_P001	Maize	extracellular	48.92	35.83
Zm00001d029408_P001	Maize	endoplasmic reticulum	34.41	31.68
Zm00001d022172_P001	Maize	golgi, peroxisome	34.95	27.66

Protein Annotations

EntrezGene:100280562	EntrezGene:100280918	MapMan:22.3.2.1	Gene3D:3.40.50.300	UniProt:A0A1D6EL67	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	InterPro:IPR024156
ProteinID:ONM20634.1	ProteinID:ONM20635.1	ProteinID:ONM20639.1	ProteinID:ONM20640.1	ProteinID:ONM20643.1	ProteinID:ONM20644.1
InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF215
SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF
InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI0008448193	EnsemblPlantsGene:Zm00001d005231	EnsemblPlants:Zm00001d005231_P006	EnsemblPlants:Zm00001d005231_T006

Description

ADP-ribosylation factor A1F

Coordinates

chr2:-:164761552..164765206

Molecular Weight (calculated)

21255.7 Da

IEP (calculated)

6.960

GRAVY (calculated)

-0.116

Length

186 amino acids

Sequence
(BLAST)

001: MGLAFGKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TTGEGLYEGL DWLSSNIASK VYIWLA

Best Arabidopsis Sequence Match ( AT1G10630.1 )
(BLAST)

001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A

Arabidopsis Description

ATARFA1FADP-ribosylation factor A1F [Source:UniProtKB/TrEMBL;Acc:Q6ID97]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.