Factsheet for Zm00001d044868_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89435	Sorghum	cytosol	94.71	94.71
Os06t0114200-00	Rice	plasma membrane	77.78	77.78
Zm00001d030157_P001	Maize	extracellular	69.31	67.53
Zm00001d051546_P001	Maize	cytosol	68.25	66.49
Zm00001d015121_P002	Maize	mitochondrion	66.67	64.95
Zm00001d017717_P001	Maize	cytosol	70.37	60.18
Zm00001d008295_P002	Maize	plastid	49.21	51.38
Zm00001d043113_P001	Maize	plastid	49.21	50.82
Zm00001d005231_P006	Maize	cytosol	49.74	50.54
Zm00001d038533_P001	Maize	plastid	48.68	50.0
Zm00001d019191_P007	Maize	peroxisome	49.74	47.24
Zm00001d013007_P001	Maize	plastid	49.74	46.31
Zm00001d052978_P001	Maize	extracellular	41.8	42.93
Zm00001d017650_P002	Maize	cytosol	38.1	40.45
Zm00001d023657_P001	Maize	cytosol	10.05	40.43
Zm00001d012537_P003	Maize	cytosol	41.27	38.42
Zm00001d033414_P001	Maize	extracellular	35.45	26.38
Zm00001d029408_P001	Maize	endoplasmic reticulum	27.51	25.74
Zm00001d022172_P001	Maize	golgi, peroxisome	29.63	23.83

Protein Annotations

EntrezGene:103637862	MapMan:22.3.2.1	Gene3D:3.40.50.300	ProteinID:AQL01042.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154
GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	InterPro:IPR024156	UniProt:K7V5E7
InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF183
SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR
TIGRFAMs:TIGR00231	UniParc:UPI000221D3E6	EnsemblPlantsGene:Zm00001d044868	EnsemblPlants:Zm00001d044868_P001	EnsemblPlants:Zm00001d044868_T001	:

Description

ADP-ribosylation factor B1B

Coordinates

chr9:+:5906668..5907820

Molecular Weight (calculated)

20771.2 Da

IEP (calculated)

8.197

GRAVY (calculated)

-0.019

Length

189 amino acids

Sequence
(BLAST)

001: MGQSLMKLFF DDSCQKEVKV VMLGLDAAGK TTALYRLHVG EALSTVPTIG FNVEKVEYKN VAFTVWDVGG QDKLRPLWRQ YLSNSDALIY VVDSVDRDRI
101: GVAREEFQAI VKDPLMLSSV VLVLANKQDM KGAMSPSEVG QRLGLYDLKN RTSRAVGACA LTGEGLHEGL GWLAATLKDA RAWGTSVRF

Best Arabidopsis Sequence Match ( AT1G10630.1 )
(BLAST)

001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A

Arabidopsis Description

ATARFA1FADP-ribosylation factor A1F [Source:UniProtKB/TrEMBL;Acc:Q6ID97]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.