Factsheet for Zm00001d012537_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G47170.2	Thale cress	mitochondrion	68.97	77.35
AT1G10630.2	Thale cress	mitochondrion	68.47	76.8
PGSC0003DMT400003226	Potato	mitochondrion	68.47	76.8
KRH56584	Soybean	mitochondrion	68.47	76.8
Bra016344.1-P	Field mustard	mitochondrion	68.47	76.8
KRG93262	Soybean	nucleus	68.47	76.8
CDX91717	Canola	mitochondrion	68.47	76.8
CDY41444	Canola	mitochondrion	68.47	76.8
Zm00001d043113_P001	Maize	plastid	68.97	76.5
AT1G23490.1	Thale cress	mitochondrion, peroxisome	67.98	76.24
CDY54291	Canola	mitochondrion, peroxisome	67.98	76.24
CDY44152	Canola	mitochondrion, peroxisome	67.98	76.24
CDY25787	Canola	mitochondrion, peroxisome	67.98	76.24
CDY11588	Canola	mitochondrion, peroxisome	67.98	76.24
CDY09441	Canola	mitochondrion, peroxisome	67.98	76.24
CDY04706	Canola	mitochondrion, peroxisome	67.98	76.24
CDY03747	Canola	mitochondrion, peroxisome	67.98	76.24
AT1G70490.4	Thale cress	mitochondrion, peroxisome	67.98	76.24
CDY47137	Canola	peroxisome	67.49	75.69
Bra024604.1-P	Field mustard	mitochondrion	67.49	75.69
VIT_14s0066g01080.t01	Wine grape	mitochondrion	67.0	75.14
Zm00001d005231_P006	Maize	cytosol	68.47	74.73
Zm00001d038533_P001	Maize	plastid	67.49	74.46
Zm00001d008295_P002	Maize	plastid	66.01	74.03
KRH36902	Soybean	endoplasmic reticulum	67.0	73.91
Bra012376.1-P	Field mustard	cytosol	67.98	73.4
Bra003954.1-P	Field mustard	cytosol	63.05	70.72
Zm00001d019191_P007	Maize	peroxisome	68.97	70.35
CDX68343	Canola	cytosol	63.05	70.33
Zm00001d013007_P001	Maize	plastid	69.46	69.46
TraesCS5B01G479100.1	Wheat	golgi	70.44	67.77
Zm00001d023657_P001	Maize	cytosol	13.79	59.57
HORVU5Hr1G111500.2	Barley	mitochondrion	67.49	58.55
CDY23500	Canola	cytosol	61.58	58.41
Zm00001d030157_P001	Maize	extracellular	45.32	47.42
Zm00001d051546_P001	Maize	cytosol	43.84	45.88
Zm00001d017650_P002	Maize	cytosol	39.41	44.94
GSMUA_Achr6P08570_001	Banana	cytosol	70.94	44.86
Zm00001d015121_P002	Maize	mitochondrion	40.39	42.27
Zm00001d044868_P001	Maize	cytosol	38.42	41.27
Zm00001d017717_P001	Maize	cytosol	44.34	40.72
Zm00001d052978_P001	Maize	extracellular	33.99	37.5
Zm00001d033414_P001	Maize	extracellular	35.96	28.74
Zm00001d029408_P001	Maize	endoplasmic reticulum	23.65	23.76
Zm00001d022172_P001	Maize	golgi, peroxisome	24.63	21.28

Protein Annotations

EntrezGene:100382775	MapMan:22.3.2.1	Gene3D:3.40.50.300	UniProt:A0A1D6G9N5	ProteinID:AQK99818.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	InterPro:IPR024156
InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF215
SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR
TIGRFAMs:TIGR00231	UniParc:UPI00084404E0	EnsemblPlantsGene:Zm00001d012537	EnsemblPlants:Zm00001d012537_P003	EnsemblPlants:Zm00001d012537_T003	SEG:seg

Description

ADP-ribosylation factor A1F

Coordinates

chr8:-:176319099..176327611

Molecular Weight (calculated)

22850.0 Da

IEP (calculated)

4.326

GRAVY (calculated)

-0.308

Length

203 amino acids

Sequence
(BLAST)

001: MNDTADATTP ATALSSLTLP DEEVDADDLD DAANTHMESK ILTIMGFLED PDQDFPGEEM GLSFGKLFSR LFAKKEMRIL MVGLDAAGKT TILYKLKLGE
101: IVTTIPTIGF NVETVEYKNI SFTVWDVGGQ DKIRPLWRHY FQNTQGLIFV VDSNDRERVV EARDELHRML NERHWYIQST CATSGEGLYE GLDWLSSNIS
201: SKS

Best Arabidopsis Sequence Match ( AT1G10630.1 )
(BLAST)

001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A

Arabidopsis Description

ATARFA1FADP-ribosylation factor A1F [Source:UniProtKB/TrEMBL;Acc:Q6ID97]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.