Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES07411 | Sorghum | cytosol | 86.43 | 98.45 |
| Zm00001d051546_P001 | Maize | cytosol | 84.16 | 95.88 |
| TraesCS6A01G268000.1 | Wheat | cytosol | 81.9 | 94.76 |
| TraesCS6D01G246900.1 | Wheat | cytosol | 81.45 | 94.24 |
| Solyc06g072800.2.1 | Tomato | cytosol | 55.2 | 92.42 |
| Solyc03g096910.2.1 | Tomato | cytosol | 54.75 | 91.67 |
| VIT_16s0039g02240.t01 | Wine grape | cytosol | 79.19 | 90.67 |
| PGSC0003DMT400069538 | Potato | cytosol | 77.38 | 88.6 |
| PGSC0003DMT400001454 | Potato | cytosol | 76.92 | 88.08 |
| Zm00001d030157_P001 | Maize | extracellular | 76.92 | 87.63 |
| KRH27742 | Soybean | cytosol | 76.02 | 87.05 |
| KRH77702 | Soybean | cytosol | 69.23 | 86.93 |
| Bra032015.1-P | Field mustard | cytosol | 75.11 | 86.46 |
| CDY28739 | Canola | cytosol | 75.11 | 86.46 |
| CDY43149 | Canola | cytosol | 75.11 | 86.46 |
| AT5G17060.2 | Thale cress | cytosol | 74.66 | 85.94 |
| Bra021371.1-P | Field mustard | cytosol | 74.21 | 85.42 |
| CDY23463 | Canola | cytosol | 74.21 | 85.42 |
| GSMUA_Achr7P04780_001 | Banana | cytosol | 72.4 | 85.11 |
| GSMUA_AchrUn_... | Banana | cytosol | 71.49 | 84.95 |
| AT3G03120.1 | Thale cress | cytosol | 73.76 | 84.9 |
| CDX69406 | Canola | cytosol | 73.76 | 84.9 |
| CDY16963 | Canola | cytosol | 73.76 | 84.9 |
| Bra008579.1-P | Field mustard | cytosol | 73.3 | 84.38 |
| KRH29023 | Soybean | cytosol | 72.85 | 82.56 |
| KRH24049 | Soybean | cytosol | 72.4 | 82.05 |
| Zm00001d015121_P002 | Maize | mitochondrion | 67.42 | 76.8 |
| Os02t0699300-01 | Rice | cytosol, extracellular, plastid | 42.99 | 76.61 |
| Zm00001d044868_P001 | Maize | cytosol | 60.18 | 70.37 |
| HORVU6Hr1G067840.2 | Barley | cytosol | 82.35 | 65.23 |
| TraesCS6B01G295200.1 | Wheat | plastid | 66.97 | 60.16 |
| Zm00001d008295_P002 | Maize | plastid | 47.06 | 57.46 |
| Zm00001d038533_P001 | Maize | plastid | 47.51 | 57.07 |
| Zm00001d043113_P001 | Maize | plastid | 47.06 | 56.83 |
| Zm00001d005231_P006 | Maize | cytosol | 47.51 | 56.45 |
| Zm00001d019191_P007 | Maize | peroxisome | 47.51 | 52.76 |
| Zm00001d013007_P001 | Maize | plastid | 47.06 | 51.23 |
| Zm00001d023657_P001 | Maize | cytosol | 10.41 | 48.94 |
| Zm00001d052978_P001 | Maize | extracellular | 38.46 | 46.2 |
| Zm00001d017650_P002 | Maize | cytosol | 35.75 | 44.38 |
| Zm00001d012537_P003 | Maize | cytosol | 40.72 | 44.34 |
| Zm00001d029408_P001 | Maize | endoplasmic reticulum | 27.15 | 29.7 |
| Zm00001d033414_P001 | Maize | extracellular | 33.48 | 29.13 |
| Zm00001d022172_P001 | Maize | golgi, peroxisome | 28.96 | 27.23 |
Protein Annotations
| EntrezGene:100381426 | MapMan:22.3.2.1 | Gene3D:3.40.50.300 | UniProt:A0A1D6HGS7 | ProteinID:AQK73801.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 | InterPro:IPR024156 |
| InterPro:P-loop_NTPase | PFAM:PF00025 | PRINTS:PR00449 | PFscan:PS51417 | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF183 |
| SMART:SM00177 | SMART:SM00178 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR |
| TIGRFAMs:TIGR00231 | UniParc:UPI000843C8F7 | EnsemblPlantsGene:Zm00001d017717 | EnsemblPlants:Zm00001d017717_P001 | EnsemblPlants:Zm00001d017717_T001 | : |
Description
ADP-ribosylation factor B1B
Coordinates
chr5:+:205082975..205085670
Molecular Weight (calculated)
24627.2 Da
IEP (calculated)
8.307
GRAVY (calculated)
0.057
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQAFRKLFD SFFGTSEMRV VMLGLDAAGK TTILYKLHIG EVLSTVPTIG RAPAITFKTN FPCKFVCDDM SLVLSLGFNV EKVQYKNVMF TVWDVGGQEK
101: LRPLWRHYFN NTDGLIYVVD SLDRERIGKA KAEFQAIIKD PLMLNSVILV LANKQDMKGA MTPMEVCEGL GLYDLKNRIW HIQGSCALKG DGLYEGLDWL
201: ASTLKELQAS GRLPSGGTSL F
101: LRPLWRHYFN NTDGLIYVVD SLDRERIGKA KAEFQAIIKD PLMLNSVILV LANKQDMKGA MTPMEVCEGL GLYDLKNRIW HIQGSCALKG DGLYEGLDWL
201: ASTLKELQAS GRLPSGGTSL F
001: MGQAFRKLFD TFFGNQEMRV VMLGLDAAGK TTILYKLHIG EVLSTVPTIG FNVEKVQYKN VMFTVWDVGG QEKLRPLWRH YFNNTDGLIY VVDSLDRERI
101: GKAKQEFQEI IKDPFMLNSI ILVFANKQDM RGAMSPREVC EGLGLFDLKN RKWHIQGTCA LRGDGLYEGL DWLSSTLKDV KAAGFTSVGH SF
101: GKAKQEFQEI IKDPFMLNSI ILVFANKQDM RGAMSPREVC EGLGLFDLKN RKWHIQGTCA LRGDGLYEGL DWLSSTLKDV KAAGFTSVGH SF
Arabidopsis Description
ATARFB1BADP-ribosylation factor B1B [Source:UniProtKB/TrEMBL;Acc:Q9LFJ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.