Factsheet for TraesCS6B01G295200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g072800.2.1	Tomato	cytosol	50.41	93.94
Solyc03g096910.2.1	Tomato	cytosol	50.0	93.18
TraesCS6A01G268000.1	Wheat	cytosol	63.41	81.68
TraesCS6D01G246900.1	Wheat	cytosol	63.01	81.15
EES07411	Sorghum	cytosol	61.38	77.84
VIT_16s0039g02240.t01	Wine grape	cytosol	60.98	77.72
Zm00001d051546_P001	Maize	cytosol	60.98	77.32
PGSC0003DMT400069538	Potato	cytosol	60.57	77.2
PGSC0003DMT400001454	Potato	cytosol	59.76	76.17
KRH27742	Soybean	cytosol	59.76	76.17
TraesCS1B01G212500.1	Wheat	cytosol	58.94	75.92
AT5G17060.2	Thale cress	cytosol	58.54	75.0
CDY28739	Canola	cytosol	58.54	75.0
Bra032015.1-P	Field mustard	cytosol	58.54	75.0
AT3G03120.1	Thale cress	cytosol	58.54	75.0
CDY43149	Canola	cytosol	58.54	75.0
Bra021371.1-P	Field mustard	cytosol	58.13	74.48
CDY23463	Canola	cytosol	58.13	74.48
KRH77702	Soybean	cytosol	53.25	74.43
CDY16963	Canola	cytosol	57.72	73.96
CDX69406	Canola	cytosol	57.72	73.96
GSMUA_Achr7P04780_001	Banana	cytosol	56.5	73.94
Bra008579.1-P	Field mustard	cytosol	57.32	73.44
Os02t0699300-01	Rice	cytosol, extracellular, plastid	36.99	73.39
KRH29023	Soybean	cytosol	58.13	73.33
GSMUA_AchrUn_...	Banana	cytosol	55.28	73.12
KRH24049	Soybean	cytosol	57.72	72.82
HORVU6Hr1G067840.2	Barley	cytosol	78.46	69.18
Zm00001d017717_P001	Maize	cytosol	60.16	66.97
TraesCS6B01G114900.2	Wheat	mitochondrion	49.19	62.37
TraesCS5B01G140900.1	Wheat	cytosol	38.62	52.49
TraesCS3B01G368600.1	Wheat	mitochondrion	38.21	51.93
TraesCS1B01G317000.1	Wheat	mitochondrion	38.21	51.09
TraesCS5B01G479100.1	Wheat	golgi	39.43	45.97
TraesCS7B01G181400.1	Wheat	cytosol, mitochondrion	34.55	42.93
TraesCS1B01G453100.1	Wheat	cytosol	19.92	41.53
TraesCS4B01G164400.1	Wheat	endoplasmic reticulum	30.89	41.3
TraesCS5B01G013100.1	Wheat	cytosol	26.83	35.68
TraesCS1B01G087700.1	Wheat	peroxisome	20.73	25.25
TraesCS2B01G191100.2	Wheat	cytosol, plastid	16.67	19.16

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	InterPro:IPR024156	InterPro:P-loop_NTPase	PFAM:PF00025
PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF300	SMART:SM00177	SMART:SM00178
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	EnsemblPlantsGene:TraesCS6B01G295200
EnsemblPlants:TraesCS6B01G295200.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6B:+:530127392..530130456

Molecular Weight (calculated)

27967.7 Da

IEP (calculated)

9.641

GRAVY (calculated)

-0.469

Length

246 amino acids

Sequence
(BLAST)

001: MLSPCCIFPT RPPRPDSSRP GRALQRTNKR CFQKKGSSFS TPCIPSHESD GDDDLREKAK RKEGGLERFD GDFGVRPADS QRSADPRRRM GQAFRKLFDA
101: FFGNSEMRVV MLGLDAAGKT TILYKLHIGE VLSTVPTIGF NVEKVQYKNV LFTVWDVGGQ EKLRPLWRHY FNNTDGLIYV VDSLDRERIG KAKAEFQTII
201: NDPFMLNSVI LVFANKQDMK GAMTPMEVCE GLGLYDLKNR VWHIQV

Best Arabidopsis Sequence Match ( AT3G03120.2 )
(BLAST)

001: MGQTFRKLFD TFFGNQEMRV VMLGLDAAGK TTILYKLHIG EVLSTVPTIG FNVEKVQYKN VIFTVWDVGG QEKLRPLWRH YFNNTDGLIY VVDSLDRERI
101: GKAKQEFQDI IRDPFMLNSV ILVFANKQDM VKVHRL

Arabidopsis Description

ATARFB1CATARFB1C [Source:UniProtKB/TrEMBL;Acc:A0A178VH47]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.