Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G019600.1 | Wheat | mitochondrion | 100.0 | 100.0 |
| Os02t0128600-01 | Rice | mitochondrion | 91.24 | 91.24 |
| Zm00001d015121_P002 | Maize | mitochondrion | 91.24 | 91.24 |
| EES06219 | Sorghum | mitochondrion | 90.72 | 90.72 |
| HORVU6Hr1G016100.1 | Barley | cytosol, mitochondrion | 94.33 | 90.59 |
| TraesCS6A01G086900.2 | Wheat | cytosol | 91.24 | 87.62 |
| TraesCS1B01G212500.1 | Wheat | cytosol | 72.68 | 73.82 |
| TraesCS3B01G368600.1 | Wheat | mitochondrion | 50.52 | 54.14 |
| TraesCS5B01G140900.1 | Wheat | cytosol | 50.52 | 54.14 |
| TraesCS1B01G317000.1 | Wheat | mitochondrion | 50.52 | 53.26 |
| TraesCS6B01G295200.1 | Wheat | plastid | 62.37 | 49.19 |
| TraesCS4B01G164400.1 | Wheat | endoplasmic reticulum | 45.36 | 47.83 |
| TraesCS7B01G181400.1 | Wheat | cytosol, mitochondrion | 47.94 | 46.97 |
| TraesCS5B01G479100.1 | Wheat | golgi | 50.52 | 46.45 |
| TraesCS1B01G453100.1 | Wheat | cytosol | 24.74 | 40.68 |
| TraesCS5B01G013100.1 | Wheat | cytosol | 37.11 | 38.92 |
| TraesCS1B01G087700.1 | Wheat | peroxisome | 34.02 | 32.67 |
| TraesCS2B01G191100.2 | Wheat | cytosol, plastid | 26.29 | 23.83 |
Protein Annotations
| MapMan:22.3.2.1 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | InterPro:IPR024156 | InterPro:P-loop_NTPase | PFAM:PF00025 |
| PRINTS:PR00328 | PFscan:PS51417 | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF183 | SMART:SM00177 | SMART:SM00178 |
| SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR | TIGRFAMs:TIGR00231 | EnsemblPlantsGene:TraesCS6B01G114900 |
| EnsemblPlants:TraesCS6B01G114900.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6B:-:98858531..98861111
Molecular Weight (calculated)
21840.4 Da
IEP (calculated)
6.121
GRAVY (calculated)
-0.119
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQALRRLFD SFFSTKEMRV VMLGLDSAGK TTILYRLHLG EVLQTVPTVG FNVEKVQYKN VAFTVWDVGG QEKLRQLWRM YLSNSDALIY VVDSLDRERI
101: EDARQEFQSI IKDPLMANSI ILVLANKQDL KGSMSPEEVI EGLGLHDLKN RIWHIQGTCA LRGEGLYDGL DWLASTLKQL QETGHATSIA GPSI
101: EDARQEFQSI IKDPLMANSI ILVLANKQDL KGSMSPEEVI EGLGLHDLKN RIWHIQGTCA LRGEGLYDGL DWLASTLKQL QETGHATSIA GPSI
001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A
Arabidopsis Description
ATARFA1FADP-ribosylation factor A1F [Source:UniProtKB/TrEMBL;Acc:Q6ID97]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.