Factsheet for TraesCS2B01G191100.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

mitochondrion 2
cytosol 2
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G069400.1	Wheat	peroxisome	75.7	79.8
HORVU1Hr1G014610.1	Barley	cytosol	75.7	79.8
TraesCS1B01G087700.1	Wheat	peroxisome	74.77	79.21
TraesCS2D01G172000.1	Wheat	peroxisome	70.09	75.38
EER99714	Sorghum	cytosol	68.69	72.41
Os07t0620400-01	Rice	cytosol	67.29	70.94
Zm00001d022172_P001	Maize	golgi, peroxisome	68.22	62.13
VIT_19s0027g00160.t01	Wine grape	cytosol, extracellular	37.85	61.83
Bra028298.1-P	Field mustard	cytosol	57.94	61.69
GSMUA_Achr11P...	Banana	endoplasmic reticulum	57.48	60.59
CDY00519	Canola	cytosol	57.94	60.19
CDY31913	Canola	cytosol	57.94	60.19
Solyc10g074630.1.1	Tomato	cytosol	54.21	60.1
GSMUA_Achr5P00190_001	Banana	extracellular	57.01	60.1
AT5G52210.2	Thale cress	cytosol	57.01	59.51
Bra029132.1-P	Field mustard	cytosol	55.61	59.2
KRH11380	Soybean	endoplasmic reticulum	55.61	58.33
CDY38908	Canola	cytosol	55.61	58.05
KRH20906	Soybean	endoplasmic reticulum	55.14	57.84
VIT_00s0215g00070.t01	Wine grape	endoplasmic reticulum	55.14	57.56
VIT_00s0189g00080.t01	Wine grape	cytosol	36.45	52.35
PGSC0003DMT400043326	Potato	cytosol	52.8	47.68
CDY32591	Canola	cytosol	55.61	47.04
TraesCS3B01G368600.1	Wheat	mitochondrion	23.83	28.18
TraesCS5B01G140900.1	Wheat	cytosol	23.83	28.18
TraesCS1B01G317000.1	Wheat	mitochondrion	23.83	27.72
TraesCS4B01G164400.1	Wheat	endoplasmic reticulum	23.83	27.72
TraesCS7B01G181400.1	Wheat	cytosol, mitochondrion	25.23	27.27
TraesCS5B01G013100.1	Wheat	cytosol	22.9	26.49
TraesCS6B01G114900.2	Wheat	mitochondrion	23.83	26.29
TraesCS1B01G212500.1	Wheat	cytosol	21.96	24.61
TraesCS5B01G479100.1	Wheat	golgi	23.83	24.17
TraesCS1B01G453100.1	Wheat	cytosol	13.08	23.73
TraesCS6B01G295200.1	Wheat	plastid	19.16	16.67

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	InterPro:IPR024156	InterPro:P-loop_NTPase	PFAM:PF00025
PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF218	SMART:SM00175	SMART:SM00177
SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231
EnsemblPlantsGene:TraesCS2B01G191100	EnsemblPlants:TraesCS2B01G191100.2	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:166468691..166471537

Molecular Weight (calculated)

24100.0 Da

IEP (calculated)

5.628

GRAVY (calculated)

-0.273

Length

214 amino acids

Sequence
(BLAST)

001: MAYGTMCSAR QSSVCSSLES IRLGRRFIPK VGMLPVMNMQ TLLEKLKSIY LKGEGLPHDR IGPTVGLNIR RIEDANVKLV FWDLGGQPGL RTIWEKYYDE
101: AHAIVYVIDS ASASTFEDAK SALEKVLRHE DLQEAPLLIF ANKQDLPAAV REEELDRHLH LKEFDERPYM FVAGSAFDGT GIKLGIEWLV EEMGKGRRTE
201: AEGTHQHICE DLAP

Best Arabidopsis Sequence Match ( AT5G52210.1 )
(BLAST)

001: MFSLMSGLWS YMFSKTEFNV LILGIDKAGK TTFLEKLKTI YSISEGLPHD RIVPTVGLNI GRIEVSNAKI VFWDLGGQPG LRSIWEKYYE EAHALIYLID
101: AACPTRFEDS KSALEKALRH EDLQGAPLLI LANKQDLTNA VSAEELDRYL DLKKLDERVY MFEAVSGYDG RGIKESIEWL VGVMEKSKRT ESLRARAGYT
201: PVPNS

Arabidopsis Description

ATARLB1At5g52210 [Source:UniProtKB/TrEMBL;Acc:Q38921]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.