Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G069400.1 | Wheat | peroxisome | 99.01 | 98.52 |
| TraesCS1D01G072000.1 | Wheat | peroxisome | 98.51 | 98.03 |
| HORVU1Hr1G014610.1 | Barley | cytosol | 97.03 | 96.55 |
| EER99714 | Sorghum | cytosol | 85.15 | 84.73 |
| Os07t0620400-01 | Rice | cytosol | 83.66 | 83.25 |
| TraesCS2B01G191100.2 | Wheat | cytosol, plastid | 79.21 | 74.77 |
| Zm00001d022172_P001 | Maize | golgi, peroxisome | 84.65 | 72.77 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 71.29 | 70.94 |
| GSMUA_Achr5P00190_001 | Banana | extracellular | 70.79 | 70.44 |
| CDY00519 | Canola | cytosol | 71.29 | 69.9 |
| CDY31913 | Canola | cytosol | 71.29 | 69.9 |
| Bra028298.1-P | Field mustard | cytosol | 69.31 | 69.65 |
| AT5G52210.2 | Thale cress | cytosol | 69.8 | 68.78 |
| CDY38908 | Canola | cytosol | 69.8 | 68.78 |
| Bra029132.1-P | Field mustard | cytosol | 67.82 | 68.16 |
| Solyc10g074630.1.1 | Tomato | cytosol | 63.86 | 66.84 |
| VIT_00s0215g00070.t01 | Wine grape | endoplasmic reticulum | 67.82 | 66.83 |
| KRH11380 | Soybean | endoplasmic reticulum | 66.83 | 66.18 |
| KRH20906 | Soybean | endoplasmic reticulum | 66.34 | 65.69 |
| VIT_19s0027g00160.t01 | Wine grape | cytosol, extracellular | 41.09 | 63.36 |
| CDY32591 | Canola | cytosol | 69.8 | 55.73 |
| VIT_00s0189g00080.t01 | Wine grape | cytosol | 40.1 | 54.36 |
| PGSC0003DMT400043326 | Potato | cytosol | 58.42 | 49.79 |
| TraesCS3B01G368600.1 | Wheat | mitochondrion | 31.19 | 34.81 |
| TraesCS5B01G140900.1 | Wheat | cytosol | 31.19 | 34.81 |
| TraesCS1B01G317000.1 | Wheat | mitochondrion | 31.19 | 34.24 |
| TraesCS6B01G114900.2 | Wheat | mitochondrion | 32.67 | 34.02 |
| TraesCS5B01G013100.1 | Wheat | cytosol | 30.2 | 32.97 |
| TraesCS4B01G164400.1 | Wheat | endoplasmic reticulum | 29.7 | 32.61 |
| TraesCS1B01G212500.1 | Wheat | cytosol | 30.69 | 32.46 |
| TraesCS7B01G181400.1 | Wheat | cytosol, mitochondrion | 31.19 | 31.82 |
| TraesCS1B01G453100.1 | Wheat | cytosol | 17.82 | 30.51 |
| TraesCS5B01G479100.1 | Wheat | golgi | 31.68 | 30.33 |
| TraesCS6B01G295200.1 | Wheat | plastid | 25.25 | 20.73 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | InterPro:IPR024156 | InterPro:P-loop_NTPase | PFAM:PF00025 |
| PRINTS:PR00449 | PFscan:PS51417 | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF218 | SMART:SM00175 | SMART:SM00177 |
| SMART:SM00178 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR | TIGRFAMs:TIGR00231 |
| EnsemblPlantsGene:TraesCS1B01G087700 | EnsemblPlants:TraesCS1B01G087700.1 | : | : | : | : |
Description
No Description!
Coordinates
chr1B:-:83206117..83212189
Molecular Weight (calculated)
22812.4 Da
IEP (calculated)
6.519
GRAVY (calculated)
-0.219
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSLLHGLWN HVFSKTEFRV LILGVHKAGK TTLLEKLKSI YLKGGLPHDR IGPTVGLNIG RIEDANVKLV FWDLGGQPGL RTIWEKYYDE AHAIVYVIDS
101: ASASTFEDAK SALEKVLRHE DLQEAPLLVF ANKQDLSAAV TEEELDRHLH LKEFDERPYM FVAGSAYDGT GIKLGIDWLV EEMGKSRRTE ALRARTDTYA
201: KI
101: ASASTFEDAK SALEKVLRHE DLQEAPLLVF ANKQDLSAAV TEEELDRHLH LKEFDERPYM FVAGSAYDGT GIKLGIDWLV EEMGKSRRTE ALRARTDTYA
201: KI
001: MFSLMSGLWS YMFSKTEFNV LILGIDKAGK TTFLEKLKTI YSISEGLPHD RIVPTVGLNI GRIEVSNAKI VFWDLGGQPG LRSIWEKYYE EAHALIYLID
101: AACPTRFEDS KSALEKALRH EDLQGAPLLI LANKQDLTNA VSAEELDRYL DLKKLDERVY MFEAVSGYDG RGIKESIEWL VGVMEKSKRT ESLRARAGYT
201: PVPNS
101: AACPTRFEDS KSALEKALRH EDLQGAPLLI LANKQDLTNA VSAEELDRYL DLKKLDERVY MFEAVSGYDG RGIKESIEWL VGVMEKSKRT ESLRARAGYT
201: PVPNS
Arabidopsis Description
ATARLB1At5g52210 [Source:UniProtKB/TrEMBL;Acc:Q38921]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.