Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G069400.1 | Wheat | peroxisome | 99.51 | 99.51 |
| TraesCS1B01G087700.1 | Wheat | peroxisome | 98.03 | 98.51 |
| HORVU1Hr1G014610.1 | Barley | cytosol | 96.55 | 96.55 |
| TraesCS2D01G172000.1 | Wheat | peroxisome | 89.66 | 91.46 |
| EER99714 | Sorghum | cytosol | 84.73 | 84.73 |
| Os07t0620400-01 | Rice | cytosol | 83.25 | 83.25 |
| Zm00001d022172_P001 | Maize | golgi, peroxisome | 84.24 | 72.77 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 71.92 | 71.92 |
| GSMUA_Achr5P00190_001 | Banana | extracellular | 71.43 | 71.43 |
| CDY00519 | Canola | cytosol | 71.92 | 70.87 |
| CDY31913 | Canola | cytosol | 71.92 | 70.87 |
| Bra028298.1-P | Field mustard | cytosol | 69.95 | 70.65 |
| AT5G52210.2 | Thale cress | cytosol | 69.95 | 69.27 |
| CDY38908 | Canola | cytosol | 69.46 | 68.78 |
| Bra029132.1-P | Field mustard | cytosol | 67.49 | 68.16 |
| Solyc10g074630.1.1 | Tomato | cytosol | 64.04 | 67.36 |
| KRH11380 | Soybean | endoplasmic reticulum | 67.49 | 67.16 |
| VIT_00s0215g00070.t01 | Wine grape | endoplasmic reticulum | 67.49 | 66.83 |
| KRH20906 | Soybean | endoplasmic reticulum | 67.0 | 66.67 |
| VIT_19s0027g00160.t01 | Wine grape | cytosol, extracellular | 41.38 | 64.12 |
| CDY32591 | Canola | cytosol | 69.46 | 55.73 |
| VIT_00s0189g00080.t01 | Wine grape | cytosol | 39.9 | 54.36 |
| PGSC0003DMT400043326 | Potato | cytosol | 58.62 | 50.21 |
| TraesCS2D01G244900.1 | Wheat | mitochondrion, peroxisome | 31.53 | 35.36 |
| TraesCS5D01G150000.1 | Wheat | cytosol | 31.53 | 34.97 |
| TraesCS5D01G020800.1 | Wheat | cytosol | 30.54 | 33.51 |
| TraesCS1D01G429700.1 | Wheat | cytosol | 30.05 | 32.97 |
| TraesCS1D01G201300.1 | Wheat | cytosol | 30.54 | 32.46 |
| TraesCS7D01G282400.1 | Wheat | cytosol, mitochondrion | 31.53 | 32.32 |
| TraesCS4D01G152600.1 | Wheat | cytosol | 29.06 | 32.07 |
| TraesCS6D01G246900.1 | Wheat | cytosol | 29.56 | 31.41 |
| TraesCS5D01G480200.1 | Wheat | unclear | 32.02 | 30.81 |
| TraesCS3D01G330500.1 | Wheat | cytosol | 31.53 | 25.5 |
| TraesCS1D01G305900.1 | Wheat | golgi | 31.53 | 24.33 |
| TraesCS4D01G018600.1 | Wheat | cytosol | 16.26 | 22.6 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | InterPro:IPR024156 | InterPro:P-loop_NTPase | PFAM:PF00025 |
| PRINTS:PR00328 | PFscan:PS51417 | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF218 | SMART:SM00175 | SMART:SM00177 |
| SMART:SM00178 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR | TIGRFAMs:TIGR00231 |
| EnsemblPlantsGene:TraesCS1D01G072000 | EnsemblPlants:TraesCS1D01G072000.1 | : | : | : | : |
Description
No Description!
Coordinates
chr1D:-:52358006..52362044
Molecular Weight (calculated)
22945.5 Da
IEP (calculated)
5.905
GRAVY (calculated)
-0.254
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSLLHGLWN HVFSKTEFRV LILGVDKAGK TTLLEKLKSI YLKGEGLPHD RIGPTVGLNI GRIEDANVKL VFWDLGGQPG LRTIWEKYYD EAHAIVYVID
101: SASASTFEDA KSALEKVLRH EDLQEAPLLV FANKQDLPAS VTEEELDRHL HLKEFDERPY MFVAGSAYDG TGIKLGIDWL VEEMGKSRRT EALRARTDTY
201: AKI
101: SASASTFEDA KSALEKVLRH EDLQEAPLLV FANKQDLPAS VTEEELDRHL HLKEFDERPY MFVAGSAYDG TGIKLGIDWL VEEMGKSRRT EALRARTDTY
201: AKI
001: MFSLMSGLWS YMFSKTEFNV LILGIDKAGK TTFLEKLKTI YSISEGLPHD RIVPTVGLNI GRIEVSNAKI VFWDLGGQPG LRSIWEKYYE EAHALIYLID
101: AACPTRFEDS KSALEKALRH EDLQGAPLLI LANKQDLTNA VSAEELDRYL DLKKLDERVY MFEAVSGYDG RGIKESIEWL VGVMEKSKRT ESLRARAGYT
201: PVPNS
101: AACPTRFEDS KSALEKALRH EDLQGAPLLI LANKQDLTNA VSAEELDRYL DLKKLDERVY MFEAVSGYDG RGIKESIEWL VGVMEKSKRT ESLRARAGYT
201: PVPNS
Arabidopsis Description
ATARLB1At5g52210 [Source:UniProtKB/TrEMBL;Acc:Q38921]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.