Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G268000.1 | Wheat | cytosol | 99.48 | 99.48 |
| EES07411 | Sorghum | cytosol | 95.81 | 94.33 |
| Solyc06g072800.2.1 | Tomato | cytosol | 64.92 | 93.94 |
| Zm00001d051546_P001 | Maize | cytosol | 94.76 | 93.3 |
| Solyc03g096910.2.1 | Tomato | cytosol | 64.4 | 93.18 |
| PGSC0003DMT400069538 | Potato | cytosol | 91.1 | 90.16 |
| VIT_16s0039g02240.t01 | Wine grape | cytosol | 90.05 | 89.12 |
| KRH27742 | Soybean | cytosol | 88.48 | 87.56 |
| TraesCS1D01G201300.1 | Wheat | cytosol | 87.43 | 87.43 |
| PGSC0003DMT400001454 | Potato | cytosol | 87.96 | 87.05 |
| AT5G17060.2 | Thale cress | cytosol | 87.43 | 86.98 |
| KRH77702 | Soybean | cytosol | 80.1 | 86.93 |
| CDY28739 | Canola | cytosol | 86.91 | 86.46 |
| CDY43149 | Canola | cytosol | 86.91 | 86.46 |
| Bra032015.1-P | Field mustard | cytosol | 86.91 | 86.46 |
| CDY16963 | Canola | cytosol | 86.39 | 85.94 |
| CDX69406 | Canola | cytosol | 86.39 | 85.94 |
| AT3G03120.1 | Thale cress | cytosol | 86.39 | 85.94 |
| CDY23463 | Canola | cytosol | 85.86 | 85.42 |
| Bra008579.1-P | Field mustard | cytosol | 85.86 | 85.42 |
| Bra021371.1-P | Field mustard | cytosol | 85.86 | 85.42 |
| GSMUA_Achr7P04780_001 | Banana | cytosol | 83.25 | 84.57 |
| GSMUA_AchrUn_... | Banana | cytosol | 82.2 | 84.41 |
| KRH29023 | Soybean | cytosol | 85.86 | 84.1 |
| KRH24049 | Soybean | cytosol | 85.34 | 83.59 |
| Zm00001d017717_P001 | Maize | cytosol | 94.24 | 81.45 |
| Os02t0699300-01 | Rice | cytosol, extracellular, plastid | 49.74 | 76.61 |
| HORVU6Hr1G067840.2 | Barley | cytosol | 98.43 | 67.38 |
| TraesCS6B01G295200.1 | Wheat | plastid | 81.15 | 63.01 |
| TraesCS2D01G244900.1 | Wheat | mitochondrion, peroxisome | 57.07 | 60.22 |
| TraesCS5D01G150000.1 | Wheat | cytosol | 56.54 | 59.02 |
| TraesCS5D01G480200.1 | Wheat | unclear | 56.02 | 50.71 |
| TraesCS7D01G282400.1 | Wheat | cytosol, mitochondrion | 51.83 | 50.0 |
| TraesCS4D01G152600.1 | Wheat | cytosol | 44.5 | 46.2 |
| TraesCS3D01G330500.1 | Wheat | cytosol | 56.02 | 42.63 |
| TraesCS5D01G020800.1 | Wheat | cytosol | 40.31 | 41.62 |
| TraesCS1D01G429700.1 | Wheat | cytosol | 39.79 | 41.08 |
| TraesCS1D01G305900.1 | Wheat | golgi | 56.02 | 40.68 |
| TraesCS4D01G018600.1 | Wheat | cytosol | 25.65 | 33.56 |
| TraesCS1D01G072000.1 | Wheat | peroxisome | 31.41 | 29.56 |
| TraesCS2D01G172000.1 | Wheat | peroxisome | 28.27 | 27.14 |
Protein Annotations
| MapMan:22.3.2.1 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | InterPro:IPR024156 | InterPro:P-loop_NTPase | PFAM:PF00025 |
| PRINTS:PR00328 | PFscan:PS51417 | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF300 | SMART:SM00177 | SMART:SM00178 |
| SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR | TIGRFAMs:TIGR00231 | EnsemblPlantsGene:TraesCS6D01G246900 |
| EnsemblPlants:TraesCS6D01G246900.1 | TIGR:cd04150 | : | : | : | : |
Description
No Description!
Coordinates
chr6D:-:349987100..349989890
Molecular Weight (calculated)
21404.0 Da
IEP (calculated)
7.502
GRAVY (calculated)
-0.066
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQAFRKLFD AFFGNSEMRV VMLGLDAAGK TTILYKLHIG EVLSTVPTIG FNVEKVQYKN VLFTVWDVGG QEKLRPLWRH YFNNTDGLIY VVDSLDRERI
101: GKAKAEFQTI INDPFMLNSV ILVFANKQDM KGAMTPMEVC ESLGLYDLKN RVWHIQGSCA LKGDGLYEGL DWLSSTLKDL QASGRLPSGG T
101: GKAKAEFQTI INDPFMLNSV ILVFANKQDM KGAMTPMEVC ESLGLYDLKN RVWHIQGSCA LKGDGLYEGL DWLSSTLKDL QASGRLPSGG T
001: MGQAFRKLFD TFFGNQEMRV VMLGLDAAGK TTILYKLHIG EVLSTVPTIG FNVEKVQYKN VMFTVWDVGG QEKLRPLWRH YFNNTDGLIY VVDSLDRERI
101: GKAKQEFQEI IKDPFMLNSI ILVFANKQDM RGAMSPREVC EGLGLFDLKN RKWHIQGTCA LRGDGLYEGL DWLSSTLKDV KAAGFTSVGH SF
101: GKAKQEFQEI IKDPFMLNSI ILVFANKQDM RGAMSPREVC EGLGLFDLKN RKWHIQGTCA LRGDGLYEGL DWLSSTLKDV KAAGFTSVGH SF
Arabidopsis Description
ATARFB1BADP-ribosylation factor B1B [Source:UniProtKB/TrEMBL;Acc:Q9LFJ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.