Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 6
- endoplasmic reticulum 1
- golgi 1
- plasma membrane 1
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16963 | Canola | cytosol | 98.44 | 98.44 |
| CDX69406 | Canola | cytosol | 98.44 | 98.44 |
| Bra008579.1-P | Field mustard | cytosol | 97.92 | 97.92 |
| Solyc06g072800.2.1 | Tomato | cytosol | 64.58 | 93.94 |
| Solyc03g096910.2.1 | Tomato | cytosol | 64.58 | 93.94 |
| AT3G03120.1 | Thale cress | cytosol | 93.75 | 93.75 |
| PGSC0003DMT400069538 | Potato | cytosol | 91.15 | 90.67 |
| KRH27742 | Soybean | cytosol | 90.62 | 90.16 |
| PGSC0003DMT400001454 | Potato | cytosol | 90.62 | 90.16 |
| KRH29023 | Soybean | cytosol | 90.62 | 89.23 |
| KRH77702 | Soybean | cytosol | 81.77 | 89.2 |
| VIT_16s0039g02240.t01 | Wine grape | cytosol | 89.58 | 89.12 |
| KRH24049 | Soybean | cytosol | 90.1 | 88.72 |
| TraesCS6A01G268000.1 | Wheat | cytosol | 87.5 | 87.96 |
| TraesCS6D01G246900.1 | Wheat | cytosol | 86.98 | 87.43 |
| EES07411 | Sorghum | cytosol | 85.94 | 85.05 |
| Zm00001d051546_P001 | Maize | cytosol | 84.9 | 84.02 |
| GSMUA_AchrUn_... | Banana | cytosol | 80.21 | 82.8 |
| GSMUA_Achr7P04780_001 | Banana | cytosol | 79.69 | 81.38 |
| Os02t0699300-01 | Rice | cytosol, extracellular, plastid | 49.48 | 76.61 |
| Zm00001d017717_P001 | Maize | cytosol | 85.94 | 74.66 |
| HORVU6Hr1G067840.2 | Barley | cytosol | 87.5 | 60.22 |
| TraesCS6B01G295200.1 | Wheat | plastid | 75.0 | 58.54 |
| AT1G10630.2 | Thale cress | mitochondrion | 54.69 | 58.01 |
| AT3G62290.1 | Thale cress | cytosol | 54.69 | 58.01 |
| AT2G47170.2 | Thale cress | mitochondrion | 54.69 | 58.01 |
| AT1G70490.4 | Thale cress | mitochondrion, peroxisome | 54.69 | 58.01 |
| AT1G23490.1 | Thale cress | mitochondrion, peroxisome | 54.69 | 58.01 |
| AT2G24765.1 | Thale cress | cytosol | 53.12 | 56.04 |
| AT5G14670.1 | Thale cress | mitochondrion | 54.69 | 55.85 |
| AT2G15310.1 | Thale cress | mitochondrion | 52.6 | 49.27 |
| AT3G22950.1 | Thale cress | cytosol | 44.27 | 46.45 |
| AT2G18390.1 | Thale cress | cytosol | 39.58 | 41.08 |
| AT5G52210.2 | Thale cress | cytosol | 29.69 | 27.8 |
Protein Annotations
| MapMan:22.3.2.1 | Gene3D:3.40.50.300 | EntrezGene:831569 | UniProt:A0A178UKV6 | ProteinID:AED92378.1 | ProteinID:ANM70028.1 |
| ArrayExpress:AT5G17060 | EnsemblPlantsGene:AT5G17060 | RefSeq:AT5G17060 | TAIR:AT5G17060 | RefSeq:AT5G17060-TAIR-G | EnsemblPlants:AT5G17060.2 |
| Symbol:ATARFB1B | EMBL:AY086691 | EMBL:AY093231 | EMBL:BT003403 | ProteinID:CAC01719.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 | InterPro:IPR024156 |
| RefSeq:NP_001331669.1 | RefSeq:NP_197208.1 | ProteinID:OAO94399.1 | InterPro:P-loop_NTPase | PFAM:PF00025 | PRINTS:PR00328 |
| PFscan:PS51417 | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF300 | UniProt:Q9LFJ7 | SMART:SM00177 | SMART:SM00178 |
| SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR | TIGRFAMs:TIGR00231 | UniParc:UPI000000BFFA |
Description
ATARFB1BADP-ribosylation factor B1B [Source:UniProtKB/TrEMBL;Acc:Q9LFJ7]
Coordinates
chr5:+:5610741..5613074
Molecular Weight (calculated)
21834.5 Da
IEP (calculated)
8.674
GRAVY (calculated)
-0.146
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQAFRKLFD TFFGNQEMRV VMLGLDAAGK TTILYKLHIG EVLSTVPTIG FNVEKVQYKN VMFTVWDVGG QEKLRPLWRH YFNNTDGLIY VVDSLDRERI
101: GKAKQEFQEI IKDPFMLNSI ILVFANKQDM RGAMSPREVC EGLGLFDLKN RKWHIQGTCA LRGDGLYEGL DWLSSTLKDV KAAGFTSVGH SF
101: GKAKQEFQEI IKDPFMLNSI ILVFANKQDM RGAMSPREVC EGLGLFDLKN RKWHIQGTCA LRGDGLYEGL DWLSSTLKDV KAAGFTSVGH SF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.