Factsheet for GSMUA_Achr7P04780_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
endoplasmic reticulum 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	92.02	93.01
Solyc06g072800.2.1	Tomato	cytosol	63.83	90.91
Solyc03g096910.2.1	Tomato	cytosol	62.77	89.39
TraesCS6A01G268000.1	Wheat	cytosol	85.11	83.77
GSMUA_Achr5P03700_001	Banana	cytosol	86.17	83.51
TraesCS6D01G246900.1	Wheat	cytosol	84.57	83.25
EES07411	Sorghum	cytosol	85.64	82.99
VIT_16s0039g02240.t01	Wine grape	cytosol	85.11	82.9
Zm00001d051546_P001	Maize	cytosol	85.11	82.47
PGSC0003DMT400069538	Potato	cytosol	84.57	82.38
GSMUA_Achr4P27450_001	Banana	cytosol	84.04	81.44
PGSC0003DMT400001454	Potato	cytosol	83.51	81.35
KRH77702	Soybean	cytosol	76.06	81.25
KRH27742	Soybean	cytosol	82.98	80.83
AT3G03120.1	Thale cress	cytosol	82.45	80.73
CDY43149	Canola	cytosol	81.91	80.21
CDY28739	Canola	cytosol	81.91	80.21
Bra032015.1-P	Field mustard	cytosol	81.91	80.21
KRH29023	Soybean	cytosol	82.98	80.0
AT5G17060.2	Thale cress	cytosol	81.38	79.69
KRH24049	Soybean	cytosol	82.45	79.49
CDY23463	Canola	cytosol	80.85	79.17
Bra021371.1-P	Field mustard	cytosol	80.85	79.17
CDY16963	Canola	cytosol	80.32	78.65
CDX69406	Canola	cytosol	80.32	78.65
Bra008579.1-P	Field mustard	cytosol	79.79	78.12
Os02t0699300-01	Rice	cytosol, extracellular, plastid	48.4	73.39
Zm00001d017717_P001	Maize	cytosol	85.11	72.4
GSMUA_Achr6P32180_001	Banana	cytosol	44.15	61.03
GSMUA_Achr10P...	Banana	cytosol	51.6	60.62
GSMUA_Achr9P05130_001	Banana	mitochondrion	57.98	60.22
GSMUA_Achr9P17120_001	Banana	cytosol	51.06	60.0
GSMUA_Achr3P09430_001	Banana	cytosol	51.06	60.0
GSMUA_Achr4P10250_001	Banana	mitochondrion	57.45	59.67
GSMUA_Achr2P11590_001	Banana	mitochondrion	56.91	59.12
GSMUA_Achr10P...	Banana	cytosol	52.13	59.04
GSMUA_Achr5P07760_001	Banana	mitochondrion	56.38	58.56
GSMUA_Achr4P02310_001	Banana	mitochondrion	56.38	58.56
GSMUA_Achr7P18350_001	Banana	cytosol	51.6	58.43
HORVU6Hr1G067840.2	Barley	cytosol	85.64	57.71
TraesCS6B01G295200.1	Wheat	plastid	73.94	56.5
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	53.72	55.49
GSMUA_Achr11P...	Banana	cytosol	57.98	54.5
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	51.6	53.3
GSMUA_Achr4P01270_001	Banana	endoplasmic reticulum	46.81	48.09
GSMUA_Achr1P04710_001	Banana	endoplasmic reticulum, extracellular	46.28	47.54
GSMUA_Achr3P18390_001	Banana	plasma membrane	57.45	44.63
GSMUA_Achr9P26270_001	Banana	cytosol	36.17	36.76
GSMUA_Achr6P08570_001	Banana	cytosol	56.91	33.33
GSMUA_Achr5P00190_001	Banana	extracellular	32.45	30.05
GSMUA_Achr11P...	Banana	endoplasmic reticulum	30.32	28.08

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264
GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr7G04780_001	EnsemblPlants:GSMUA_Achr7P04780_001	EnsemblPlants:GSMUA_Achr7T04780_001	InterPro:IPR024156
UniProt:M0TER8	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF300	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI0002965332	:	:

Description

ADP-ribosylation factor [Source:GMGC_GENE;Acc:GSMUA_Achr7G04780_001]

Coordinates

chr7:+:3591974..3598613

Molecular Weight (calculated)

21372.0 Da

IEP (calculated)

6.960

GRAVY (calculated)

-0.010

Length

188 amino acids

Sequence
(BLAST)

001: MGQAFRKLFD RFFSPVEMRV VMLGLDAAGK TTILYKLHIG EVLSTVPTIG FNVEKVQYKN VVFTVWDVGG QEKLRPLWRH YFSNTDALIY VVDSLDRERI
101: GKAKEEFQAI IRDPFMLSSV ILVFANKQDL KGAMTPVEVS EGLGLYDLRN RTWHVQETCA LSGDGLYEGL DWLVTALKEL QVSGRHIT

Best Arabidopsis Sequence Match ( AT5G17060.2 )
(BLAST)

001: MGQAFRKLFD TFFGNQEMRV VMLGLDAAGK TTILYKLHIG EVLSTVPTIG FNVEKVQYKN VMFTVWDVGG QEKLRPLWRH YFNNTDGLIY VVDSLDRERI
101: GKAKQEFQEI IKDPFMLNSI ILVFANKQDM RGAMSPREVC EGLGLFDLKN RKWHIQGTCA LRGDGLYEGL DWLSSTLKDV KAAGFTSVGH SF

Arabidopsis Description

ATARFB1BADP-ribosylation factor B1B [Source:UniProtKB/TrEMBL;Acc:Q9LFJ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.