Factsheet for GSMUA_Achr6P32180_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
nucleus 1
mitochondrion 2
cytosol 3
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P17120_001	Banana	cytosol	96.32	81.88
GSMUA_Achr3P09430_001	Banana	cytosol	95.59	81.25
GSMUA_Achr10P...	Banana	cytosol	94.85	80.62
GSMUA_Achr7P18350_001	Banana	cytosol	96.32	78.92
GSMUA_Achr10P...	Banana	cytosol	95.59	78.31
GSMUA_Achr5P07760_001	Banana	mitochondrion	99.26	74.59
GSMUA_Achr2P11590_001	Banana	mitochondrion	99.26	74.59
Zm00001d008295_P002	Maize	plastid	98.53	74.03
GSMUA_Achr9P05130_001	Banana	mitochondrion	97.79	73.48
GSMUA_Achr4P02310_001	Banana	mitochondrion	97.79	73.48
GSMUA_Achr4P10250_001	Banana	mitochondrion	97.79	73.48
GSMUA_Achr11P...	Banana	cytosol	98.53	67.0
GSMUA_Achr3P18390_001	Banana	plasma membrane	98.53	55.37
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	64.71	48.35
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	63.97	47.8
GSMUA_Achr7P04780_001	Banana	cytosol	61.03	44.15
GSMUA_AchrUn_...	Banana	cytosol	60.29	44.09
GSMUA_Achr5P03700_001	Banana	cytosol	61.76	43.3
GSMUA_Achr1P04710_001	Banana	endoplasmic reticulum, extracellular	57.35	42.62
GSMUA_Achr4P27450_001	Banana	cytosol	60.29	42.27
GSMUA_Achr6P08570_001	Banana	cytosol	99.26	42.06
GSMUA_Achr4P01270_001	Banana	endoplasmic reticulum	55.88	41.53
GSMUA_Achr9P26270_001	Banana	cytosol	49.26	36.22
GSMUA_Achr5P00190_001	Banana	extracellular	36.03	24.14
GSMUA_Achr11P...	Banana	endoplasmic reticulum	36.03	24.14

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264
GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr6G32180_001	EnsemblPlants:GSMUA_Achr6P32180_001	EnsemblPlants:GSMUA_Achr6T32180_001	InterPro:IPR024156
UniProt:M0TC13	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF215	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI00029529BC	:	:

Description

ADP-ribosylation factor [Source:GMGC_GENE;Acc:GSMUA_Achr6G32180_001]

Coordinates

chr6:+:31667668..31674278

Molecular Weight (calculated)

15679.0 Da

IEP (calculated)

6.521

GRAVY (calculated)

-0.187

Length

136 amino acids

Sequence
(BLAST)

001: MRILMVGLDA AGKTTILYKL KLGEIVTTIP TIGFNVETVE YKNISFTVWD VGGQDKIRPL WRHYFQNTQG LIFVVDSNDR DRVVEARDEL HRMLNEDELR
101: DAVLLVFANK QDLPNAMNAA EITDKLGLHS LRLRHW

Best Arabidopsis Sequence Match ( AT1G10630.1 )
(BLAST)

001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A

Arabidopsis Description

ATARFA1FADP-ribosylation factor A1F [Source:UniProtKB/TrEMBL;Acc:Q6ID97]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.