Factsheet for GSMUA_Achr1P04710_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

nucleus 1
cytosol 3
extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P01270_001	Banana	endoplasmic reticulum	95.63	95.63
Os11t0586900-02	Rice	cytosol	87.98	87.5
KRH34351	Soybean	endoplasmic reticulum	85.79	85.79
KRG92448	Soybean	endoplasmic reticulum	85.25	85.25
KRG92441	Soybean	endoplasmic reticulum	85.25	85.25
EES08754	Sorghum	cytosol, mitochondrion	85.25	84.78
TraesCS4D01G152600.1	Wheat	cytosol	84.7	84.24
TraesCS4B01G164400.1	Wheat	endoplasmic reticulum	84.7	84.24
VIT_05s0020g04460.t01	Wine grape	cytosol	55.19	84.17
Zm00001d052978_P001	Maize	extracellular	84.15	83.7
TraesCS4A01G149200.1	Wheat	cytosol	84.15	83.7
AT3G22950.1	Thale cress	cytosol	83.61	83.61
Solyc03g005300.2.1	Tomato	cytosol	83.61	83.61
PGSC0003DMT400034971	Potato	cytosol	83.06	83.06
HORVU4Hr1G038090.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	83.06	82.61
Bra036878.1-P	Field mustard	cytosol	82.51	82.51
Bra039725.1-P	Field mustard	cytosol	82.51	82.51
CDY16265	Canola	cytosol	82.51	82.51
CDY29751	Canola	cytosol	82.51	82.51
CDY36874	Canola	cytosol	82.51	82.51
CDY53727	Canola	cytosol	82.51	82.51
KRH34356	Soybean	cytosol, extracellular	61.2	80.58
GSMUA_Achr6P32180_001	Banana	cytosol	42.62	57.35
GSMUA_Achr3P09430_001	Banana	cytosol	49.73	56.88
GSMUA_Achr10P...	Banana	cytosol	49.73	56.88
GSMUA_Achr9P17120_001	Banana	cytosol	49.73	56.88
GSMUA_Achr10P...	Banana	cytosol	50.27	55.42
GSMUA_Achr7P18350_001	Banana	cytosol	49.73	54.82
GSMUA_Achr9P05130_001	Banana	mitochondrion	54.1	54.7
GSMUA_Achr4P02310_001	Banana	mitochondrion	53.55	54.14
GSMUA_Achr4P10250_001	Banana	mitochondrion	53.55	54.14
GSMUA_Achr5P07760_001	Banana	mitochondrion	53.55	54.14
GSMUA_Achr2P11590_001	Banana	mitochondrion	53.01	53.59
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	50.27	50.55
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	50.27	50.55
GSMUA_Achr11P...	Banana	cytosol	53.55	49.0
GSMUA_Achr7P04780_001	Banana	cytosol	47.54	46.28
GSMUA_AchrUn_...	Banana	cytosol	46.45	45.7
GSMUA_Achr5P03700_001	Banana	cytosol	46.99	44.33
GSMUA_Achr4P27450_001	Banana	cytosol	46.99	44.33
GSMUA_Achr3P18390_001	Banana	plasma membrane	54.64	41.32
GSMUA_Achr9P26270_001	Banana	cytosol	36.07	35.68
GSMUA_Achr6P08570_001	Banana	cytosol	53.01	30.22
GSMUA_Achr5P00190_001	Banana	extracellular	32.79	29.56
GSMUA_Achr11P...	Banana	endoplasmic reticulum	30.6	27.59

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264
GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr1G04710_001	EnsemblPlants:GSMUA_Achr1P04710_001	EnsemblPlants:GSMUA_Achr1T04710_001	InterPro:IPR024156
UniProt:M0RX29	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF290	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	SignalP:SignalP-noTM
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI000294AD97	:

Description

ADP-ribosylation factor-like protein 5 [Source:GMGC_GENE;Acc:GSMUA_Achr1G04710_001]

Coordinates

chr1:-:3909402..3913384

Molecular Weight (calculated)

20507.6 Da

IEP (calculated)

6.393

GRAVY (calculated)

-0.053

Length

183 amino acids

Sequence
(BLAST)

001: MGALLSRFWF MLFPASEYKI VVVGLDNAGK TTTLYKLHLG EVVNTSPTIG SNVEEVVYKN IRFEVWDLGG QERLRTSWAT YYRGSHALIA VIDSTDRARI
101: NIMKDELFRL LQHGDLEHTV VLVFANKQDL KDAMSPAEIT DALSLHSIKN HDWHIQACCA ITGEGLYDGL GWIAERVAGK PTT

Best Arabidopsis Sequence Match ( AT3G22950.1 )
(BLAST)

001: MGAFMSRFWF MMFPAKEYKI VVVGLDNAGK TTTLYKLHLG EVVTTHPTVG SNVEELVYKN IRFEVWDLGG QDRLRTSWAT YYRGTHAVIV VIDSTDRARI
101: SFMKDELARL LGHEDLQNSV ILVFANKQDL KDAMTPAEIT DALNLHSIKN HDWHIQASCA VTGEGLYDGL GWIAQKVTGK ATS

Arabidopsis Description

ATARFC1ADP-ribosylation factor C1 [Source:UniProtKB/TrEMBL;Acc:Q9LIK1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.