Factsheet for HORVU4Hr1G038090.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G152600.1	Wheat	cytosol	97.28	97.28
TraesCS4A01G149200.1	Wheat	cytosol	96.74	96.74
TraesCS4B01G164400.1	Wheat	endoplasmic reticulum	96.2	96.2
Os11t0586900-02	Rice	cytosol	93.48	93.48
EES08754	Sorghum	cytosol, mitochondrion	92.39	92.39
Zm00001d052978_P001	Maize	extracellular	91.3	91.3
GSMUA_Achr4P01270_001	Banana	endoplasmic reticulum	84.24	84.7
AT3G22950.1	Thale cress	cytosol	82.61	83.06
GSMUA_Achr1P04710_001	Banana	endoplasmic reticulum, extracellular	82.61	83.06
VIT_05s0020g04460.t01	Wine grape	cytosol	53.26	81.67
CDY53727	Canola	cytosol	80.98	81.42
Bra039725.1-P	Field mustard	cytosol	80.98	81.42
KRG92448	Soybean	endoplasmic reticulum	80.98	81.42
Solyc03g005300.2.1	Tomato	cytosol	80.43	80.87
KRH34351	Soybean	endoplasmic reticulum	80.43	80.87
KRG92441	Soybean	endoplasmic reticulum	80.43	80.87
PGSC0003DMT400034971	Potato	cytosol	79.89	80.33
Bra036878.1-P	Field mustard	cytosol	79.89	80.33
CDY16265	Canola	cytosol	79.89	80.33
CDY29751	Canola	cytosol	79.89	80.33
CDY36874	Canola	cytosol	79.89	80.33
KRH34356	Soybean	cytosol, extracellular	57.61	76.26
HORVU7Hr1G061220.1	Barley	cytosol, mitochondrion	44.57	45.05
HORVU1Hr1G051350.1	Barley	cytosol	45.65	43.98
HORVU6Hr1G016100.1	Barley	cytosol, mitochondrion	47.83	43.56
HORVU5Hr1G111500.2	Barley	mitochondrion	51.09	40.17
HORVU1Hr1G068790.1	Barley	plastid	51.09	39.83
HORVU5Hr1G045440.2	Barley	cytosol, plastid	51.63	37.7
HORVU0Hr1G027130.1	Barley	plasma membrane	51.09	37.01
HORVU2Hr1G054780.5	Barley	cytosol	31.52	33.92
HORVU6Hr1G067840.2	Barley	cytosol	46.2	30.47
HORVU3Hr1G079700.1	Barley	cytosol	51.09	30.23
HORVU1Hr1G014610.1	Barley	cytosol	32.61	29.56
HORVU5Hr1G004340.2	Barley	cytosol, plastid	33.7	26.05
HORVU5Hr1G002120.6	Barley	cytosol, plastid	33.7	24.41

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005886	GO:GO:0007154	GO:GO:0007165
GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	EnsemblPlantsGene:HORVU4Hr1G038090	EnsemblPlants:HORVU4Hr1G038090.1
InterPro:IPR024156	UniProt:M0UKZ0	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417
PANTHER:PTHR11711	PANTHER:PTHR11711:SF290	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI000295ED3E	:

Description

No Description!

Coordinates

chrchr4H:-:286339638..286343983

Molecular Weight (calculated)

20391.4 Da

IEP (calculated)

6.681

GRAVY (calculated)

0.002

Length

184 amino acids

Sequence
(BLAST)

001: MGAWMSRVWF LMFPAKEYKI VVVGLDNAGK TTTLYKLHLG EAVTAAPTIG SNVEEVVFKN IRFEVWDLGG QESLRTSWAT YYRGTHAVIV VIDSTDRSRI
101: NIIKDELFRL IQHADLDNTA VLVFANKQDL KDAMSAAEIT DALSLHSIKN RDWHIQASCA LTGEGLYDGM GWIAQKVAGK ATAS

Best Arabidopsis Sequence Match ( AT3G22950.1 )
(BLAST)

001: MGAFMSRFWF MMFPAKEYKI VVVGLDNAGK TTTLYKLHLG EVVTTHPTVG SNVEELVYKN IRFEVWDLGG QDRLRTSWAT YYRGTHAVIV VIDSTDRARI
101: SFMKDELARL LGHEDLQNSV ILVFANKQDL KDAMTPAEIT DALNLHSIKN HDWHIQASCA VTGEGLYDGL GWIAQKVTGK ATS

Arabidopsis Description

ATARFC1ADP-ribosylation factor C1 [Source:UniProtKB/TrEMBL;Acc:Q9LIK1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.