Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007917.1-P | Field mustard | cytosol | 61.99 | 70.67 |
| GSMUA_Achr9P17120_001 | Banana | cytosol | 63.74 | 68.12 |
| Solyc12g099080.1.1 | Tomato | unclear | 61.99 | 47.53 |
| HORVU5Hr1G111500.2 | Barley | mitochondrion | 64.33 | 47.01 |
| HORVU1Hr1G068790.1 | Barley | plastid | 63.74 | 46.19 |
| HORVU0Hr1G027130.1 | Barley | plasma membrane | 63.74 | 42.91 |
| Solyc04g025560.2.1 | Tomato | unclear | 62.57 | 42.29 |
| HORVU5Hr1G045440.2 | Barley | cytosol, plastid | 61.4 | 41.67 |
| HORVU7Hr1G061220.1 | Barley | cytosol, mitochondrion | 40.94 | 38.46 |
| HORVU1Hr1G051350.1 | Barley | cytosol | 41.52 | 37.17 |
| HORVU3Hr1G079700.1 | Barley | cytosol | 63.74 | 35.05 |
| HORVU4Hr1G038090.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 33.92 | 31.52 |
| HORVU6Hr1G016100.1 | Barley | cytosol, mitochondrion | 34.5 | 29.21 |
| HORVU6Hr1G067840.2 | Barley | cytosol | 39.77 | 24.37 |
| HORVU5Hr1G004340.2 | Barley | cytosol, plastid | 32.16 | 23.11 |
| HORVU1Hr1G014610.1 | Barley | cytosol | 25.73 | 21.67 |
| HORVU5Hr1G002120.6 | Barley | cytosol, plastid | 32.16 | 21.65 |
Protein Annotations
| MapMan:22.3.2.1 | Gene3D:3.40.50.300 | UniProt:A0A287I1L6 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | EnsemblPlantsGene:HORVU2Hr1G054780 | EnsemblPlants:HORVU2Hr1G054780.5 |
| InterPro:IPR024156 | InterPro:P-loop_NTPase | PFAM:PF00025 | PRINTS:PR00328 | PFscan:PS51417 | PANTHER:PTHR11711 |
| PANTHER:PTHR11711:SF225 | SMART:SM00177 | SMART:SM00178 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF |
| InterPro:Small_GTPase_ARF/SAR | TIGRFAMs:TIGR00231 | UniParc:UPI000B48871A | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr2H:+:337572010..337573170
Molecular Weight (calculated)
19727.5 Da
IEP (calculated)
8.511
GRAVY (calculated)
-0.365
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLLNSLYLS LNNDMVTMFP SKNAGFNVET VEYKNISFTV WDVGGQDKIR PLWRHYFQNT QGLIFVVDSN DRDRVVEARD ELHRMLNEDE LRDAVLLVFA
101: NKQDLPNAMN AAEITDKLGL HSLRQRHCFG IHLHKSNSNG ATHFVRSRSF GSARIKSWPN APIQIDVRLQ L
101: NKQDLPNAMN AAEITDKLGL HSLRQRHCFG IHLHKSNSNG ATHFVRSRSF GSARIKSWPN APIQIDVRLQ L
001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A
Arabidopsis Description
ATARFA1FADP-ribosylation factor A1F [Source:UniProtKB/TrEMBL;Acc:Q6ID97]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.