Factsheet for Bra007917.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
endoplasmic reticulum 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P17120_001	Banana	cytosol	87.33	81.88
Bra024604.1-P	Field mustard	mitochondrion	88.0	72.93
Bra016344.1-P	Field mustard	mitochondrion	88.0	72.93
Bra004475.1-P	Field mustard	cytosol	87.33	72.38
Bra027153.1-P	Field mustard	cytosol	86.67	71.82
Bra014403.1-P	Field mustard	cytosol	86.67	71.82
Bra021387.1-P	Field mustard	cytosol	86.0	71.27
Bra016215.1-P	Field mustard	cytosol	85.33	70.72
Bra012376.1-P	Field mustard	cytosol	87.33	69.68
Bra008746.1-P	Field mustard	mitochondrion	86.67	68.78
Bra003954.1-P	Field mustard	cytosol	81.33	67.4
Bra000443.1-P	Field mustard	cytosol	86.0	67.19
HORVU2Hr1G054780.5	Barley	cytosol	70.67	61.99
Solyc12g099080.1.1	Tomato	unclear	88.67	59.64
Solyc04g025560.2.1	Tomato	unclear	87.33	51.78
Bra032062.1-P	Field mustard	cytosol	51.33	42.31
Bra007833.1-P	Field mustard	cytosol	51.33	42.31
Bra011295.1-P	Field mustard	cytosol	50.67	41.76
Bra008579.1-P	Field mustard	cytosol	50.67	39.58
Bra032015.1-P	Field mustard	cytosol	50.0	39.06
Bra021371.1-P	Field mustard	cytosol	50.0	39.06
Bra039725.1-P	Field mustard	cytosol	46.0	37.7
Bra036878.1-P	Field mustard	cytosol	45.33	37.16
Bra039613.1-P	Field mustard	cytosol	42.0	34.05
Bra024470.1-P	Field mustard	cytosol	40.67	32.97
Bra028298.1-P	Field mustard	cytosol	29.33	21.89
Bra029132.1-P	Field mustard	cytosol	29.33	21.89
Bra036410.1-P	Field mustard	mitochondrion	56.0	20.0

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra007917	EnsemblPlants:Bra007917.1	EnsemblPlants:Bra007917.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	InterPro:IPR024156
UniProt:M4CUM2	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF225	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF
InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI0002546A4C	:	:	:

Description

AT1G70490 (E=5e-074) ATARFA1D, ARFA1D | ARFA1D; GTP binding / phospholipase activator/ protein binding

Coordinates

chrA02:-:11831681..11832968

Molecular Weight (calculated)

17274.2 Da

IEP (calculated)

4.990

GRAVY (calculated)

-0.535

Length

150 amino acids

Sequence
(BLAST)

001: MNNANDSADL LKSIFDSRRF NVETVEYKNI SFTVWDVGGQ DKIRPLWRHY FQNTQGLIFV VDSNDRDRVV EARDELHRML NEDELRDAVL LVFANKQDLP
101: NAMNAAEITD KLGLHSLRQR HWYIQSTCAT SGEGLYEGLD WLSNNIAGKA

Best Arabidopsis Sequence Match ( AT1G70490.1 )
(BLAST)

001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIAGK A

Arabidopsis Description

ARF2-AADP-ribosylation factor 2-B [Source:UniProtKB/Swiss-Prot;Acc:P0DH91]
SUBAcon: [mitochondrion,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.