Factsheet for Bra021387.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
nucleus 1
mitochondrion 3
peroxisome 1
endoplasmic reticulum 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004475.1-P	Field mustard	cytosol	98.89	98.89
Solyc01g100860.2.1	Tomato	unclear	98.34	98.34
Bra027153.1-P	Field mustard	cytosol	98.34	98.34
Bra014403.1-P	Field mustard	cytosol	98.34	98.34
Bra016344.1-P	Field mustard	mitochondrion	97.79	97.79
Zm00001d043113_P001	Maize	plastid	97.79	96.72
Bra024604.1-P	Field mustard	mitochondrion	96.69	96.69
GSMUA_Achr5P07760_001	Banana	mitochondrion	96.69	96.69
Bra016215.1-P	Field mustard	cytosol	96.13	96.13
CDX95712	Canola	cytosol	99.45	94.74
Bra012376.1-P	Field mustard	cytosol	97.79	94.15
CDX83340	Canola	cytosol	98.89	93.72
Bra000443.1-P	Field mustard	cytosol	98.34	92.71
Bra008746.1-P	Field mustard	mitochondrion	96.69	92.59
Bra003954.1-P	Field mustard	cytosol	90.06	90.06
Bra007917.1-P	Field mustard	cytosol	71.27	86.0
OQU87737	Sorghum	cytosol	97.79	66.79
Bra011295.1-P	Field mustard	cytosol	60.22	59.89
Bra032062.1-P	Field mustard	cytosol	59.67	59.34
Bra007833.1-P	Field mustard	cytosol	59.67	59.34
Bra008579.1-P	Field mustard	cytosol	59.12	55.73
Bra032015.1-P	Field mustard	cytosol	58.56	55.21
Bra021371.1-P	Field mustard	cytosol	58.56	55.21
Bra036878.1-P	Field mustard	cytosol	52.49	51.91
Bra039725.1-P	Field mustard	cytosol	52.49	51.91
Bra039613.1-P	Field mustard	cytosol	48.07	47.03
Bra024470.1-P	Field mustard	cytosol	46.96	45.95
Bra029132.1-P	Field mustard	cytosol	33.7	30.35
Bra028298.1-P	Field mustard	cytosol	33.7	30.35
Bra036410.1-P	Field mustard	mitochondrion	63.54	27.38

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra021387	EnsemblPlants:Bra021387.1	EnsemblPlants:Bra021387.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	InterPro:IPR024156
UniProt:M4DXZ1	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF182	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF
InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI0002544CC8	SEG:seg	:	:

Description

AT3G62290 (E=2e-093) ATARFA1E | ATARFA1E (ADP-ribosylation factor A1E); GTP binding / phospholipase activator/ protein binding

Coordinates

chrA01:-:25422815..25423704

Molecular Weight (calculated)

20576.8 Da

IEP (calculated)

6.960

GRAVY (calculated)

-0.224

Length

181 amino acids

Sequence
(BLAST)

001: MGLSFGKLFS KLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIS VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIANK V

Best Arabidopsis Sequence Match ( AT3G62290.2 )
(BLAST)

001: MGLSFGKLFS KLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIANK A

Arabidopsis Description

ARFA1EADP-ribosylation factor A1E [Source:UniProtKB/TrEMBL;Acc:Q9M1P5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.