Factsheet for Bra011295.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1
endoplasmic reticulum 3
golgi 3
extracellular 2
vacuole 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum, golgi
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75192	Canola	cytosol	100.0	100.0
CDX68781	Canola	cytosol	100.0	100.0
Bra007833.1-P	Field mustard	cytosol	97.25	97.25
Bra032062.1-P	Field mustard	cytosol	97.25	97.25
KRH02913	Soybean	cytosol	85.71	93.98
KRH18982	Soybean	endoplasmic reticulum	88.46	93.6
Solyc07g006640.2.1	Tomato	plastid	93.41	93.41
VIT_04s0008g07360.t01	Wine grape	cytosol, mitochondrion	91.21	91.71
EES14799	Sorghum	cytosol, mitochondrion	91.21	91.21
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	90.66	90.66
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	90.66	90.66
Os08t0248900-01	Rice	nucleus, plasma membrane	90.11	90.11
HORVU7Hr1G061220.1	Barley	cytosol, mitochondrion	89.56	89.56
TraesCS7D01G282400.1	Wheat	cytosol, mitochondrion	89.56	82.32
TraesCS7B01G181400.1	Wheat	cytosol, mitochondrion	89.56	82.32
TraesCS7A01G284000.3	Wheat	cytosol, mitochondrion	89.01	81.82
PGSC0003DMT400070636	Potato	cytosol, mitochondrion	85.71	61.42
Bra016344.1-P	Field mustard	mitochondrion	59.89	60.22
Bra021387.1-P	Field mustard	cytosol	59.89	60.22
Bra024604.1-P	Field mustard	mitochondrion	59.89	60.22
Bra027153.1-P	Field mustard	cytosol	59.89	60.22
Bra004475.1-P	Field mustard	cytosol	59.89	60.22
Bra014403.1-P	Field mustard	cytosol	59.34	59.67
Bra003954.1-P	Field mustard	cytosol	58.79	59.12
Bra016215.1-P	Field mustard	cytosol	58.79	59.12
Bra008746.1-P	Field mustard	mitochondrion	60.44	58.2
Bra012376.1-P	Field mustard	cytosol	59.89	57.98
Bra000443.1-P	Field mustard	cytosol	59.89	56.77
Bra032015.1-P	Field mustard	cytosol	57.14	54.17
Bra021371.1-P	Field mustard	cytosol	56.59	53.65
Bra008579.1-P	Field mustard	cytosol	55.49	52.6
Bra007917.1-P	Field mustard	cytosol	41.76	50.67
Bra039725.1-P	Field mustard	cytosol	48.35	48.09
Bra036878.1-P	Field mustard	cytosol	48.35	48.09
Bra039613.1-P	Field mustard	cytosol	43.41	42.7
Bra024470.1-P	Field mustard	cytosol	41.76	41.08
Bra029132.1-P	Field mustard	cytosol	34.62	31.34
Bra028298.1-P	Field mustard	cytosol	34.07	30.85
Bra036410.1-P	Field mustard	mitochondrion	51.65	22.38

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra011295	EnsemblPlants:Bra011295.1	EnsemblPlants:Bra011295.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	InterPro:IPR024156
UniProt:M4D491	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF182	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF
InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI0002546802	SEG:seg	:	:

Description

AT2G24765 (E=9e-093) ARF3, ARL1, ATARL1 | ARF3 (ADP-RIBOSYLATION FACTOR 3); protein binding

Coordinates

chrA01:-:2884442..2886218

Molecular Weight (calculated)

20243.4 Da

IEP (calculated)

5.020

GRAVY (calculated)

0.017

Length

182 amino acids

Sequence
(BLAST)

001: MGIVFTKLFS SVFGNKEARI LVLGLDNAGK TTILYRLQMG EVVSTIPTIG FNVETVQYNN IKFQVWDLGG QTSIRPYWRC YFPNTQAVIY VVDSSDTDRI
101: GVAKEEFHAI LEEEELKGAM VLIFANKQDL PGALDDAAVT EALELHKIKS RQWAIFKTCA VKGEGLFEGL DWLSNTLKSG TG

Best Arabidopsis Sequence Match ( AT2G24765.1 )
(BLAST)

001: MGILFTRMFS SVFGNKEARI LVLGLDNAGK TTILYRLQMG EVVSTIPTIG FNVETVQYNN IKFQVWDLGG QTSIRPYWRC YFPNTQAVIY VVDSSDTDRI
101: GVAKEEFHAI LEEDELKGAV VLIFANKQDL PGALDDAAVT EALELHKIKS RQWAIFKTCA VKGEGLFEGL DWLSNTLKSG SG

Arabidopsis Description

ARF3ADP-ribosylation factor 3 [Source:UniProtKB/Swiss-Prot;Acc:P40940]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.