Factsheet for Bra000443.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
mitochondrion 3
endoplasmic reticulum 2
golgi 2
extracellular 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum, golgi
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83340	Canola	cytosol	98.44	98.95
CDX95712	Canola	cytosol	97.4	98.42
Bra004475.1-P	Field mustard	cytosol	92.71	98.34
Bra021387.1-P	Field mustard	cytosol	92.71	98.34
Bra027153.1-P	Field mustard	cytosol	92.19	97.79
Solyc01g100860.2.1	Tomato	unclear	92.19	97.79
Bra014403.1-P	Field mustard	cytosol	92.19	97.79
Bra016344.1-P	Field mustard	mitochondrion	91.67	97.24
Zm00001d043113_P001	Maize	plastid	91.67	96.17
Bra024604.1-P	Field mustard	mitochondrion	90.62	96.13
GSMUA_Achr5P07760_001	Banana	mitochondrion	90.62	96.13
Bra016215.1-P	Field mustard	cytosol	90.1	95.58
Bra012376.1-P	Field mustard	cytosol	91.67	93.62
Bra008746.1-P	Field mustard	mitochondrion	90.62	92.06
Bra003954.1-P	Field mustard	cytosol	84.38	89.5
Bra007917.1-P	Field mustard	cytosol	67.19	86.0
OQU87737	Sorghum	cytosol	91.67	66.42
Bra011295.1-P	Field mustard	cytosol	56.77	59.89
Bra032062.1-P	Field mustard	cytosol	56.25	59.34
Bra007833.1-P	Field mustard	cytosol	56.25	59.34
Bra032015.1-P	Field mustard	cytosol	56.25	56.25
Bra008579.1-P	Field mustard	cytosol	56.25	56.25
Bra021371.1-P	Field mustard	cytosol	56.25	56.25
Bra036878.1-P	Field mustard	cytosol	50.0	52.46
Bra039725.1-P	Field mustard	cytosol	49.48	51.91
Bra039613.1-P	Field mustard	cytosol	44.79	46.49
Bra024470.1-P	Field mustard	cytosol	43.75	45.41
Bra029132.1-P	Field mustard	cytosol	31.77	30.35
Bra028298.1-P	Field mustard	cytosol	31.77	30.35
Bra036410.1-P	Field mustard	mitochondrion	62.5	28.57

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra000443	EnsemblPlants:Bra000443.1	EnsemblPlants:Bra000443.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	InterPro:IPR024156
UniProt:M4C8B5	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF182	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI000253FF2A	SEG:seg	:

Description

AT3G62290 (E=4e-100) ATARFA1E | ATARFA1E (ADP-ribosylation factor A1E); GTP binding / phospholipase activator/ protein binding

Coordinates

chrA03:+:11154506..11155596

Molecular Weight (calculated)

21693.0 Da

IEP (calculated)

6.523

GRAVY (calculated)

-0.182

Length

192 amino acids

Sequence
(BLAST)

001: MGVSFGKLFS KLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWDIQSTCA TSGEGLYEGL DWLSNNIANK VSSSSSSSTF IF

Best Arabidopsis Sequence Match ( AT2G47170.1 )
(BLAST)

001: MGLSFGKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A

Arabidopsis Description

ARF1ADP-ribosylation factor 1 [Source:UniProtKB/Swiss-Prot;Acc:P36397]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.