Factsheet for Bra024470.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29231	Canola	cytosol	98.38	98.38
Bra039613.1-P	Field mustard	cytosol	98.38	98.38
AT2G18390.1	Thale cress	cytosol	97.3	97.3
KRH76824	Soybean	cytosol	92.97	92.97
KRH28677	Soybean	cytosol	92.97	92.97
VIT_04s0023g01820.t01	Wine grape	cytosol	90.81	90.81
TraesCS1B01G453100.1	Wheat	cytosol	57.3	89.83
Solyc07g014650.2.1	Tomato	cytosol	81.08	88.76
TraesCS5B01G013100.1	Wheat	cytosol	88.65	88.65
TraesCS5A01G014900.1	Wheat	cytosol	88.11	88.11
TraesCS5D01G020800.1	Wheat	cytosol	88.11	88.11
GSMUA_Achr9P26270_001	Banana	cytosol	87.57	87.57
TraesCS1D01G429700.1	Wheat	cytosol	87.57	87.57
KXG37868	Sorghum	cytosol	87.57	87.57
Os02t0327100-01	Rice	cytosol	85.41	85.41
TraesCS1A01G421700.1	Wheat	cytosol	87.03	81.73
PGSC0003DMT400043258	Potato	cytosol	43.24	80.81
HORVU5Hr1G004340.2	Barley	cytosol, plastid	88.11	68.49
TraesCS4A01G292900.1	Wheat	cytosol	44.32	65.6
TraesCS4D01G018600.1	Wheat	cytosol	51.35	65.07
HORVU5Hr1G002120.6	Barley	cytosol, plastid	87.57	63.78
Zm00001d033414_P001	Maize	extracellular	87.03	63.39
Bra027153.1-P	Field mustard	cytosol	46.49	47.51
Bra014403.1-P	Field mustard	cytosol	45.95	46.96
Bra004475.1-P	Field mustard	cytosol	45.95	46.96
Bra021387.1-P	Field mustard	cytosol	45.95	46.96
Bra016344.1-P	Field mustard	mitochondrion	45.41	46.41
Bra016215.1-P	Field mustard	cytosol	45.41	46.41
Bra024604.1-P	Field mustard	mitochondrion	44.86	45.86
Bra012376.1-P	Field mustard	cytosol	45.41	44.68
Bra000443.1-P	Field mustard	cytosol	45.41	43.75
Bra008746.1-P	Field mustard	mitochondrion	44.32	43.39
Bra003954.1-P	Field mustard	cytosol	42.16	43.09
Bra011295.1-P	Field mustard	cytosol	41.08	41.76
Bra032062.1-P	Field mustard	cytosol	40.54	41.21
Bra007833.1-P	Field mustard	cytosol	40.54	41.21
Bra007917.1-P	Field mustard	cytosol	32.97	40.67
Bra008579.1-P	Field mustard	cytosol	40.54	39.06
Bra032015.1-P	Field mustard	cytosol	40.0	38.54
Bra021371.1-P	Field mustard	cytosol	40.0	38.54
Bra039725.1-P	Field mustard	cytosol	36.22	36.61
Bra036878.1-P	Field mustard	cytosol	36.22	36.61
Bra028298.1-P	Field mustard	cytosol	32.97	30.35
Bra029132.1-P	Field mustard	cytosol	32.43	29.85
Bra036410.1-P	Field mustard	mitochondrion	40.54	17.86

Protein Annotations

MapMan:20.3.3.2	MapMan:22.3.2.1	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra024470	EnsemblPlants:Bra024470.1	EnsemblPlants:Bra024470.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987
InterPro:IPR024156	UniProt:M4E6R5	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417
PANTHER:PTHR11711	PANTHER:PTHR11711:SF26	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI000253EF30	SEG:seg	:

Description

AT2G18390 (E=8e-092) TTN5, HAL, ARL2, ATARLC1 | TTN5 (TITAN 5); GTP binding / GTPase

Coordinates

chrA06:-:15979294..15980281

Molecular Weight (calculated)

21167.8 Da

IEP (calculated)

6.538

GRAVY (calculated)

-0.228

Length

185 amino acids

Sequence
(BLAST)

001: MGLLSIIRKI KKKEKEMRIL MVGLDNSGKT TIVLKMNGED TSVISPTLGF NIKTIIYQKY TLNIWDVGGH KTIRSYWRNY FEQTDGLVWA VDSYDLRRLD
101: DCKMELDNLL KEERLAGSSL LILANKQDIQ GALTPEEIGK VLNLESMDKS RHWKIVGCSA YTGEGLLEGF DWLVQDIASR IYMLD

Best Arabidopsis Sequence Match ( AT2G18390.1 )
(BLAST)

001: MGLLSIIRKI KKKEKEMRIL MVGLDNSGKT TIVLKINGED TSVISPTLGF NIKTIIYQKY TLNIWDVGGQ KTIRSYWRNY FEQTDGLVWV VDSSDLRRLD
101: DCKMELDNLL KEERLAGSSL LILANKQDIQ GALTPDEIGK VLNLESMDKS RHWKIVGCSA YTGEGLLEGF DWLVQDIASR IYMLD

Arabidopsis Description

ARL2TTN5 [Source:UniProtKB/TrEMBL;Acc:A0A178VQD7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.