Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G018600.1 | Wheat | cytosol | 70.4 | 60.27 |
| KXG37868 | Sorghum | cytosol | 70.4 | 47.57 |
| Os02t0327100-01 | Rice | cytosol | 69.6 | 47.03 |
| GSMUA_Achr9P26270_001 | Banana | cytosol | 68.8 | 46.49 |
| TraesCS5A01G014900.1 | Wheat | cytosol | 68.0 | 45.95 |
| VIT_04s0023g01820.t01 | Wine grape | cytosol | 68.0 | 45.95 |
| Bra039613.1-P | Field mustard | cytosol | 67.2 | 45.41 |
| CDY29231 | Canola | cytosol | 67.2 | 45.41 |
| CDY36479 | Canola | cytosol | 67.2 | 45.41 |
| KRH28677 | Soybean | cytosol | 67.2 | 45.41 |
| KRH76824 | Soybean | cytosol | 67.2 | 45.41 |
| AT2G18390.1 | Thale cress | cytosol | 67.2 | 45.41 |
| Bra024470.1-P | Field mustard | cytosol | 65.6 | 44.32 |
| TraesCS1A01G421700.1 | Wheat | cytosol | 67.2 | 42.64 |
| Solyc07g014650.2.1 | Tomato | cytosol | 57.6 | 42.6 |
| CDY13039 | Canola | cytosol | 67.2 | 34.29 |
| Zm00001d033414_P001 | Maize | extracellular | 69.6 | 34.25 |
| PGSC0003DMT400043258 | Potato | cytosol | 25.6 | 32.32 |
| TraesCS2A01G235500.1 | Wheat | golgi, plastid | 38.4 | 26.52 |
| TraesCS3A01G337300.1 | Wheat | mitochondrion | 38.4 | 26.37 |
| TraesCS5A01G142100.1 | Wheat | cytosol | 37.6 | 25.97 |
| TraesCS1A01G306200.1 | Wheat | mitochondrion | 38.4 | 25.81 |
| TraesCS5A01G467400.1 | Wheat | cytosol | 39.2 | 23.22 |
| TraesCS7A01G284000.3 | Wheat | cytosol, mitochondrion | 33.6 | 21.21 |
| TraesCS1A01G197800.1 | Wheat | golgi | 32.0 | 20.94 |
| TraesCS6A01G268000.1 | Wheat | cytosol | 32.0 | 20.94 |
| TraesCS4A01G149200.1 | Wheat | cytosol | 24.8 | 16.85 |
| TraesCS6A01G086900.2 | Wheat | cytosol | 25.6 | 15.84 |
| TraesCS1A01G069400.1 | Wheat | peroxisome | 24.0 | 14.78 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G292900.1 | EnsemblPlantsGene:TraesCS4A01G292900 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | InterPro:IPR024156 | InterPro:P-loop_NTPase |
| InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF26 | PFAM:PF00025 | PFscan:PS51417 |
| PRINTS:PR00328 | SEG:seg | SMART:SM00177 | SUPFAM:SSF52540 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr4A:+:595329657..595352176
Molecular Weight (calculated)
14381.6 Da
IEP (calculated)
8.078
GRAVY (calculated)
-0.170
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MRLLTIIPKI KVKEKEMRIL MVGLDNSGKT TIVLKVNGKD TSVINPTLGF NIKTVKYHKC SLNIWDVCRW DVGGSYWRNY FEQTGGLVWV VDNSDICRLD
101: DRHAELHNLL KEEVLLLGHQ ESDVL
101: DRHAELHNLL KEEVLLLGHQ ESDVL
001: MGLLSIIRKI KKKEKEMRIL MVGLDNSGKT TIVLKINGED TSVISPTLGF NIKTIIYQKY TLNIWDVGGQ KTIRSYWRNY FEQTDGLVWV VDSSDLRRLD
101: DCKMELDNLL KEERLAGSSL LILANKQDIQ GALTPDEIGK VLNLESMDKS RHWKIVGCSA YTGEGLLEGF DWLVQDIASR IYMLD
101: DCKMELDNLL KEERLAGSSL LILANKQDIQ GALTPDEIGK VLNLESMDKS RHWKIVGCSA YTGEGLLEGF DWLVQDIASR IYMLD
Arabidopsis Description
ARL2TTN5 [Source:UniProtKB/TrEMBL;Acc:A0A178VQD7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.