CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28677	Soybean	cytosol	100.0	100.0
VIT_04s0023g01820.t01	Wine grape	cytosol	95.14	95.14
Bra039613.1-P	Field mustard	cytosol	94.59	94.59
CDY29231	Canola	cytosol	94.59	94.59
AT2G18390.1	Thale cress	cytosol	94.59	94.59
CDY36479	Canola	cytosol	94.05	94.05
Solyc07g014650.2.1	Tomato	cytosol	85.41	93.49
Bra024470.1-P	Field mustard	cytosol	92.97	92.97
TraesCS1B01G453100.1	Wheat	cytosol	58.92	92.37
GSMUA_Achr9P26270_001	Banana	cytosol	90.27	90.27
KXG37868	Sorghum	cytosol	89.73	89.73
TraesCS5D01G020800.1	Wheat	cytosol	89.19	89.19
TraesCS5B01G013100.1	Wheat	cytosol	89.19	89.19
TraesCS5A01G014900.1	Wheat	cytosol	89.19	89.19
Os02t0327100-01	Rice	cytosol	89.19	89.19
TraesCS1D01G429700.1	Wheat	cytosol	87.57	87.57
PGSC0003DMT400043258	Potato	cytosol	46.49	86.87
TraesCS1A01G421700.1	Wheat	cytosol	88.11	82.74
CDY13039	Canola	cytosol	94.59	71.43
HORVU5Hr1G004340.2	Barley	cytosol, plastid	89.19	69.33
TraesCS4A01G292900.1	Wheat	cytosol	45.41	67.2
TraesCS4D01G018600.1	Wheat	cytosol	51.89	65.75
Zm00001d033414_P001	Maize	extracellular	89.73	65.35
HORVU5Hr1G002120.6	Barley	cytosol, plastid	88.65	64.57
KRG93262	Soybean	nucleus	47.57	48.62
KRH56584	Soybean	mitochondrion	47.57	48.62
KRG90489	Soybean	mitochondrion	47.03	48.07
KRG96566	Soybean	mitochondrion	47.03	48.07
KRH33780	Soybean	mitochondrion, peroxisome	46.49	47.51
KRH45651	Soybean	mitochondrion	46.49	47.51
KRG99354	Soybean	mitochondrion	46.49	47.51
KRH69574	Soybean	endoplasmic reticulum, nucleus	46.49	47.51
KRH31758	Soybean	mitochondrion	47.03	47.28
KRH36902	Soybean	endoplasmic reticulum	46.49	46.74
KRH18982	Soybean	endoplasmic reticulum	43.24	46.51
KRH74584	Soybean	nucleus	46.49	45.26
KRH77051	Soybean	mitochondrion	43.78	44.51
KRH02913	Soybean	cytosol	37.84	42.17
KRH34356	Soybean	cytosol, extracellular	31.35	41.73
KRH77702	Soybean	cytosol	38.38	40.34
KRH29023	Soybean	cytosol	41.62	39.49
KRH24049	Soybean	cytosol	41.62	39.49
KRH27742	Soybean	cytosol	41.08	39.38
KRH69176	Soybean	endoplasmic reticulum	47.03	39.01
KRG92441	Soybean	endoplasmic reticulum	38.38	38.8
KRG92448	Soybean	endoplasmic reticulum	37.84	38.25
KRH34351	Soybean	endoplasmic reticulum	37.84	38.25
KRH07000	Soybean	extracellular, golgi	23.24	35.54
KRH11380	Soybean	endoplasmic reticulum	37.3	33.82
KRH20906	Soybean	endoplasmic reticulum	36.76	33.33

Protein Annotations

EntrezGene:100805880	MapMan:20.3.3.2	MapMan:22.3.2.1	Gene3D:3.40.50.300	EMBL:ACUP02000643	EMBL:ACUP02006760
EnsemblPlantsGene:GLYMA_01G176300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150
GO:GO:0009987	UniProt:I1LHS7	InterPro:IPR024156	ProteinID:KRH28677.1	EnsemblPlants:KRH76824	ProteinID:KRH76824
ProteinID:KRH76824.1	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF26	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI0002336DC3	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:-:51281898..51284509

Molecular Weight (calculated)

21122.6 Da

IEP (calculated)

6.013

GRAVY (calculated)

-0.201

Length

185 amino acids

Sequence
(BLAST)

001: MGLLSIIRKI KRKEKEMRIL MVGLDNSGKT TIVLKINGED TSVISPTLGF NIKTITYQKY TLNIWDVGGQ KTIRSYWRNY FEQTDGLVWV VDSSDLRRLD
101: DCKFELDNLL KEERLSGASL LILANKQDIK GALTPEEIAK VLNLEAMDKS RHWQIVGCSA YTGEGLLEGF DWLVQDIASR IYMLD

Best Arabidopsis Sequence Match ( AT2G18390.1 )
(BLAST)

001: MGLLSIIRKI KKKEKEMRIL MVGLDNSGKT TIVLKINGED TSVISPTLGF NIKTIIYQKY TLNIWDVGGQ KTIRSYWRNY FEQTDGLVWV VDSSDLRRLD
101: DCKMELDNLL KEERLAGSSL LILANKQDIQ GALTPDEIGK VLNLESMDKS RHWKIVGCSA YTGEGLLEGF DWLVQDIASR IYMLD

Arabidopsis Description

ARL2TTN5 [Source:UniProtKB/TrEMBL;Acc:A0A178VQD7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.