Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G292900.1 | Wheat | cytosol | 60.27 | 70.4 |
| Os02t0327100-01 | Rice | cytosol | 67.81 | 53.51 |
| KXG37868 | Sorghum | cytosol | 66.44 | 52.43 |
| GSMUA_Achr9P26270_001 | Banana | cytosol | 66.44 | 52.43 |
| CDY29231 | Canola | cytosol | 65.75 | 51.89 |
| CDY36479 | Canola | cytosol | 65.75 | 51.89 |
| KRH28677 | Soybean | cytosol | 65.75 | 51.89 |
| KRH76824 | Soybean | cytosol | 65.75 | 51.89 |
| Bra039613.1-P | Field mustard | cytosol | 65.75 | 51.89 |
| AT2G18390.1 | Thale cress | cytosol | 65.75 | 51.89 |
| VIT_04s0023g01820.t01 | Wine grape | cytosol | 65.75 | 51.89 |
| TraesCS5D01G020800.1 | Wheat | cytosol | 65.75 | 51.89 |
| TraesCS1D01G429700.1 | Wheat | cytosol | 65.07 | 51.35 |
| Bra024470.1-P | Field mustard | cytosol | 65.07 | 51.35 |
| Solyc07g014650.2.1 | Tomato | cytosol | 55.48 | 47.93 |
| PGSC0003DMT400043258 | Potato | cytosol | 28.77 | 42.42 |
| CDY13039 | Canola | cytosol | 66.44 | 39.59 |
| Zm00001d033414_P001 | Maize | extracellular | 66.44 | 38.19 |
| TraesCS2D01G244900.1 | Wheat | mitochondrion, peroxisome | 37.67 | 30.39 |
| TraesCS5D01G150000.1 | Wheat | cytosol | 36.99 | 29.51 |
| TraesCS1D01G201300.1 | Wheat | cytosol | 34.25 | 26.18 |
| TraesCS6D01G246900.1 | Wheat | cytosol | 33.56 | 25.65 |
| TraesCS5D01G480200.1 | Wheat | unclear | 36.99 | 25.59 |
| TraesCS3D01G330500.1 | Wheat | cytosol | 37.67 | 21.91 |
| TraesCS7D01G282400.1 | Wheat | cytosol, mitochondrion | 29.45 | 21.72 |
| TraesCS1D01G305900.1 | Wheat | golgi | 37.67 | 20.91 |
| TraesCS4D01G152600.1 | Wheat | cytosol | 26.03 | 20.65 |
| TraesCS2D01G172000.1 | Wheat | peroxisome | 22.6 | 16.58 |
| TraesCS1D01G072000.1 | Wheat | peroxisome | 22.6 | 16.26 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G018600.1 | EnsemblPlantsGene:TraesCS4D01G018600 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005525 | InterPro:P-loop_NTPase | InterPro:Small_GTPase_ARF/SAR | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF26 | PFAM:PF00025 |
| SEG:seg | SMART:SM00177 | SUPFAM:SSF52540 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr4D:-:7912111..7918770
Molecular Weight (calculated)
16781.7 Da
IEP (calculated)
10.176
GRAVY (calculated)
-0.258
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLLGIIRKI KVKEKEMCIL MVGLDNSGKT TIVLKVNGKD MSVINPTLGF NIKTVNYHKY SLNIWDKTIR SYWRNYFEQT GGLVWVLDSL DIRRLDDCLL
101: IMISNSQGKM PMGVSKRVDG RWHRQITSGQ NLLDSSGYIQ QQIRET
101: IMISNSQGKM PMGVSKRVDG RWHRQITSGQ NLLDSSGYIQ QQIRET
001: MGLLSIIRKI KKKEKEMRIL MVGLDNSGKT TIVLKINGED TSVISPTLGF NIKTIIYQKY TLNIWDVGGQ KTIRSYWRNY FEQTDGLVWV VDSSDLRRLD
101: DCKMELDNLL KEERLAGSSL LILANKQDIQ GALTPDEIGK VLNLESMDKS RHWKIVGCSA YTGEGLLEGF DWLVQDIASR IYMLD
101: DCKMELDNLL KEERLAGSSL LILANKQDIQ GALTPDEIGK VLNLESMDKS RHWKIVGCSA YTGEGLLEGF DWLVQDIASR IYMLD
Arabidopsis Description
ARL2TTN5 [Source:UniProtKB/TrEMBL;Acc:A0A178VQD7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.