Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH76824 | Soybean | cytosol | 95.14 | 95.14 |
| KRH28677 | Soybean | cytosol | 95.14 | 95.14 |
| AT2G18390.1 | Thale cress | cytosol | 92.97 | 92.97 |
| Bra039613.1-P | Field mustard | cytosol | 92.43 | 92.43 |
| CDY29231 | Canola | cytosol | 92.43 | 92.43 |
| CDY36479 | Canola | cytosol | 91.89 | 91.89 |
| Bra024470.1-P | Field mustard | cytosol | 90.81 | 90.81 |
| TraesCS1B01G453100.1 | Wheat | cytosol | 57.84 | 90.68 |
| Solyc07g014650.2.1 | Tomato | cytosol | 82.7 | 90.53 |
| KXG37868 | Sorghum | cytosol | 90.27 | 90.27 |
| Os02t0327100-01 | Rice | cytosol | 88.65 | 88.65 |
| TraesCS5D01G020800.1 | Wheat | cytosol | 88.65 | 88.65 |
| GSMUA_Achr9P26270_001 | Banana | cytosol | 88.65 | 88.65 |
| TraesCS5A01G014900.1 | Wheat | cytosol | 88.65 | 88.65 |
| TraesCS5B01G013100.1 | Wheat | cytosol | 88.65 | 88.65 |
| TraesCS1D01G429700.1 | Wheat | cytosol | 87.03 | 87.03 |
| PGSC0003DMT400043258 | Potato | cytosol | 44.86 | 83.84 |
| TraesCS1A01G421700.1 | Wheat | cytosol | 87.57 | 82.23 |
| CDY13039 | Canola | cytosol | 92.43 | 69.8 |
| HORVU5Hr1G004340.2 | Barley | cytosol, plastid | 88.65 | 68.91 |
| TraesCS4A01G292900.1 | Wheat | cytosol | 45.95 | 68.0 |
| TraesCS4D01G018600.1 | Wheat | cytosol | 51.89 | 65.75 |
| Zm00001d033414_P001 | Maize | extracellular | 89.73 | 65.35 |
| HORVU5Hr1G002120.6 | Barley | cytosol, plastid | 88.11 | 64.17 |
| VIT_05s0020g00490.t01 | Wine grape | cytosol | 47.03 | 47.03 |
| VIT_14s0066g01080.t01 | Wine grape | mitochondrion | 45.41 | 46.41 |
| VIT_01s0127g00440.t01 | Wine grape | cytosol, mitochondrion | 46.49 | 43.88 |
| VIT_04s0008g07360.t01 | Wine grape | cytosol, mitochondrion | 42.7 | 43.65 |
| VIT_05s0020g04460.t01 | Wine grape | cytosol | 26.49 | 40.83 |
| VIT_16s0039g02240.t01 | Wine grape | cytosol | 40.54 | 38.86 |
| VIT_07s0129g01090.t01 | Wine grape | mitochondrion | 39.46 | 36.87 |
| VIT_11s0052g01720.t01 | Wine grape | cytosol, mitochondrion | 42.7 | 35.59 |
| VIT_00s0215g00070.t01 | Wine grape | endoplasmic reticulum | 36.22 | 32.68 |
| VIT_07s0005g02000.t01 | Wine grape | cytosol | 47.03 | 31.75 |
| VIT_19s0027g00160.t01 | Wine grape | cytosol, extracellular | 21.62 | 30.53 |
| VIT_00s0189g00080.t01 | Wine grape | cytosol | 24.32 | 30.2 |
| VIT_00s2604g00010.t01 | Wine grape | extracellular | 15.68 | 29.0 |
| VIT_14s0060g00690.t01 | Wine grape | golgi | 47.03 | 25.29 |
Protein Annotations
| EntrezGene:100252991 | wikigene:100252991 | MapMan:20.3.3.2 | MapMan:22.3.2.1 | Gene3D:3.40.50.300 | UniProt:A5C2I4 |
| EMBL:AM479791 | ProteinID:CAN72979 | ProteinID:CAN72979.1 | ProteinID:CBI17514 | ProteinID:CBI17514.3 | EMBL:FN594959 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 |
| InterPro:IPR024156 | EntrezGene:LOC100252991 | wikigene:LOC100252991 | InterPro:P-loop_NTPase | PFAM:PF00025 | PRINTS:PR00328 |
| PFscan:PS51417 | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF26 | SMART:SM00175 | SMART:SM00177 | SMART:SM00178 |
| SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR | TIGR:TC55817 | TIGRFAMs:TIGR00231 |
| UniParc:UPI0001522394 | ArrayExpress:VIT_04s0023g01820 | EnsemblPlantsGene:VIT_04s0023g01820 | EnsemblPlants:VIT_04s0023g01820.t01 | unigene:Vvi.8833 | RefSeq:XP_002267002 |
| RefSeq:XP_002267002.1 | RefSeq:XP_010649144.1 | RefSeq:XP_010649145.1 | RefSeq:XP_010649146.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr4:-:18396772..18400703
Molecular Weight (calculated)
21003.6 Da
IEP (calculated)
7.412
GRAVY (calculated)
-0.134
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLLSIIRKI KRKEKEMRIL MVGLDNSGKT TIVLKINGED TSVISPTLGF NIKTITYHKY TLNIWDVGGQ RTIRSYWRNY FEQTDGLVWV VDSSDLRRLD
101: DCKMELDNLL KEERLSGASL LILANKQDIN GALTPAEIAK VLNLEAMDKT RHWKIVGCSA ITGEGLLEGF DWLVQDIASR IYVLD
101: DCKMELDNLL KEERLSGASL LILANKQDIN GALTPAEIAK VLNLEAMDKT RHWKIVGCSA ITGEGLLEGF DWLVQDIASR IYVLD
001: MGLLSIIRKI KKKEKEMRIL MVGLDNSGKT TIVLKINGED TSVISPTLGF NIKTIIYQKY TLNIWDVGGQ KTIRSYWRNY FEQTDGLVWV VDSSDLRRLD
101: DCKMELDNLL KEERLAGSSL LILANKQDIQ GALTPDEIGK VLNLESMDKS RHWKIVGCSA YTGEGLLEGF DWLVQDIASR IYMLD
101: DCKMELDNLL KEERLAGSSL LILANKQDIQ GALTPDEIGK VLNLESMDKS RHWKIVGCSA YTGEGLLEGF DWLVQDIASR IYMLD
Arabidopsis Description
ARL2TTN5 [Source:UniProtKB/TrEMBL;Acc:A0A178VQD7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.