Factsheet for HORVU5Hr1G004340.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G020800.1	Wheat	cytosol	77.73	100.0
TraesCS5A01G014900.1	Wheat	cytosol	77.73	100.0
TraesCS1B01G453100.1	Wheat	cytosol	49.16	99.15
TraesCS5B01G013100.1	Wheat	cytosol	76.89	98.92
TraesCS1D01G429700.1	Wheat	cytosol	76.05	97.84
TraesCS1A01G421700.1	Wheat	cytosol	78.57	94.92
KXG37868	Sorghum	cytosol	73.53	94.59
Os02t0327100-01	Rice	cytosol	71.43	91.89
AT2G18390.1	Thale cress	cytosol	70.59	90.81
Solyc07g014650.2.1	Tomato	cytosol	64.29	90.53
Bra039613.1-P	Field mustard	cytosol	69.75	89.73
CDY29231	Canola	cytosol	69.75	89.73
KRH28677	Soybean	cytosol	69.33	89.19
KRH76824	Soybean	cytosol	69.33	89.19
GSMUA_Achr9P26270_001	Banana	cytosol	69.33	89.19
CDY36479	Canola	cytosol	69.33	89.19
VIT_04s0023g01820.t01	Wine grape	cytosol	68.91	88.65
Bra024470.1-P	Field mustard	cytosol	68.49	88.11
PGSC0003DMT400043258	Potato	cytosol	34.45	82.83
HORVU5Hr1G002120.6	Barley	cytosol, plastid	84.03	78.74
Zm00001d033414_P001	Maize	extracellular	74.37	69.69
CDY13039	Canola	cytosol	69.75	67.76
HORVU7Hr1G061220.1	Barley	cytosol, mitochondrion	31.93	41.76
HORVU1Hr1G051350.1	Barley	cytosol	32.77	40.84
HORVU5Hr1G111500.2	Barley	mitochondrion	36.55	37.18
HORVU1Hr1G068790.1	Barley	plastid	36.13	36.44
HORVU6Hr1G016100.1	Barley	cytosol, mitochondrion	30.67	36.14
HORVU5Hr1G045440.2	Barley	cytosol, plastid	36.55	34.52
HORVU0Hr1G027130.1	Barley	plasma membrane	36.13	33.86
HORVU4Hr1G038090.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	26.05	33.7
HORVU2Hr1G054780.5	Barley	cytosol	23.11	32.16
HORVU1Hr1G014610.1	Barley	cytosol	26.47	31.03
HORVU3Hr1G079700.1	Barley	cytosol	37.4	28.62
HORVU6Hr1G067840.2	Barley	cytosol	33.19	28.32

Protein Annotations

MapMan:20.3.3.2	MapMan:22.3.2.1	Gene3D:3.40.50.300	UniProt:A0A287Q7Y5	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154
GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:HORVU5Hr1G004340	EnsemblPlants:HORVU5Hr1G004340.2
InterPro:IPR024156	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF26	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF
InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI000B46C5CA	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr5H:+:7954849..7962263

Molecular Weight (calculated)

27279.9 Da

IEP (calculated)

9.787

GRAVY (calculated)

-0.462

Length

238 amino acids

Sequence
(BLAST)

001: PKPTPAETLA YLPESTKLNP STNQLIHLPS SRRRRRPYFS TGRNRRGLQE ELEMGLLSII RKIKRKEKEM RILMVGLDNS GKTTIVLKIN GEDTSVISPT
101: LGFNIKTIQY QKYSLNIWDV GGQKTIRSYW RNYFEQTDGL VWVVDSSDVR RLDDCRAELH NLLKEERLAG SSLLVFANKQ DIQGALKPDE IAKVLNLEVM
201: NKDRHWKIVG CSAYTGDGLL QGFDWLVQDI ASRIYVLD

Best Arabidopsis Sequence Match ( AT2G18390.1 )
(BLAST)

001: MGLLSIIRKI KKKEKEMRIL MVGLDNSGKT TIVLKINGED TSVISPTLGF NIKTIIYQKY TLNIWDVGGQ KTIRSYWRNY FEQTDGLVWV VDSSDLRRLD
101: DCKMELDNLL KEERLAGSSL LILANKQDIQ GALTPDEIGK VLNLESMDKS RHWKIVGCSA YTGEGLLEGF DWLVQDIASR IYMLD

Arabidopsis Description

ARL2TTN5 [Source:UniProtKB/TrEMBL;Acc:A0A178VQD7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.