Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G019600.1 | Wheat | mitochondrion | 90.59 | 94.33 |
| TraesCS6B01G114900.2 | Wheat | mitochondrion | 90.59 | 94.33 |
| Zm00001d015121_P002 | Maize | mitochondrion | 84.16 | 87.63 |
| EES06219 | Sorghum | mitochondrion | 83.66 | 87.11 |
| Os02t0128600-01 | Rice | mitochondrion | 83.66 | 87.11 |
| TraesCS6A01G086900.2 | Wheat | cytosol | 83.17 | 83.17 |
| HORVU1Hr1G051350.1 | Barley | cytosol | 68.32 | 72.25 |
| HORVU7Hr1G061220.1 | Barley | cytosol, mitochondrion | 45.54 | 50.55 |
| HORVU6Hr1G067840.2 | Barley | cytosol | 69.8 | 50.54 |
| HORVU4Hr1G038090.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 43.56 | 47.83 |
| HORVU5Hr1G111500.2 | Barley | mitochondrion | 49.01 | 42.31 |
| HORVU1Hr1G068790.1 | Barley | plastid | 48.51 | 41.53 |
| HORVU5Hr1G045440.2 | Barley | cytosol, plastid | 48.51 | 38.89 |
| HORVU0Hr1G027130.1 | Barley | plasma membrane | 48.51 | 38.58 |
| HORVU2Hr1G054780.5 | Barley | cytosol | 29.21 | 34.5 |
| HORVU3Hr1G079700.1 | Barley | cytosol | 48.51 | 31.51 |
| HORVU5Hr1G004340.2 | Barley | cytosol, plastid | 36.14 | 30.67 |
| HORVU1Hr1G014610.1 | Barley | cytosol | 30.69 | 30.54 |
| HORVU5Hr1G002120.6 | Barley | cytosol, plastid | 36.14 | 28.74 |
Protein Annotations
| MapMan:22.3.2.1 | Gene3D:3.40.50.300 | UniProt:A0A287TES0 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:HORVU6Hr1G016100 | EnsemblPlants:HORVU6Hr1G016100.1 | InterPro:IPR024156 |
| InterPro:P-loop_NTPase | PFAM:PF00025 | PRINTS:PR00328 | PFscan:PS51417 | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF183 |
| SMART:SM00177 | SMART:SM00178 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR |
| TIGRFAMs:TIGR00231 | UniParc:UPI000B468606 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr6H:+:36026750..36030110
Molecular Weight (calculated)
22991.0 Da
IEP (calculated)
5.347
GRAVY (calculated)
-0.120
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQALRRLFD SFFSTKEMRV VMLGLDSAGK TTILYRLHLG EVLQTVPTVG FNVEKVQYKN VAFTVWDVGG QEKLRQLWRM YLSNSDALIY VVDSLDRERI
101: EDARQEFQTI IKDPLMANSI ILVLANKQDL KGSMSPEEVI EGLGLHDLKN RIWHIQGTCA LRGEGLYDGL DWLASTLKQL QEGPAMLLQL LDLLSSFTDR
201: EK
101: EDARQEFQTI IKDPLMANSI ILVLANKQDL KGSMSPEEVI EGLGLHDLKN RIWHIQGTCA LRGEGLYDGL DWLASTLKQL QEGPAMLLQL LDLLSSFTDR
201: EK
001: MGQAFRKLFD TFFGNQEMRV VMLGLDAAGK TTILYKLHIG EVLSTVPTIG FNVEKVQYKN VMFTVWDVGG QEKLRPLWRH YFNNTDGLIY VVDSLDRERI
101: GKAKQEFQEI IKDPFMLNSI ILVFANKQDM RGAMSPREVC EGLGLFDLKN RKWHIQGTCA LRGDGLYEGL DWLSSTLKDV KAAGFTSVGH SF
101: GKAKQEFQEI IKDPFMLNSI ILVFANKQDM RGAMSPREVC EGLGLFDLKN RKWHIQGTCA LRGDGLYEGL DWLSSTLKDV KAAGFTSVGH SF
Arabidopsis Description
ATARFB1BADP-ribosylation factor B1B [Source:UniProtKB/TrEMBL;Acc:Q9LFJ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.