Factsheet for Zm00001d015121_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES06219	Sorghum	mitochondrion	98.97	98.97
Os02t0128600-01	Rice	mitochondrion	96.39	96.39
TraesCS6B01G114900.2	Wheat	mitochondrion	91.24	91.24
TraesCSU01G019600.1	Wheat	mitochondrion	91.24	91.24
HORVU6Hr1G016100.1	Barley	cytosol, mitochondrion	87.63	84.16
TraesCS6A01G086900.2	Wheat	cytosol	84.02	80.69
Zm00001d030157_P001	Maize	extracellular	75.26	75.26
Zm00001d051546_P001	Maize	cytosol	73.71	73.71
Zm00001d017717_P001	Maize	cytosol	76.8	67.42
Zm00001d044868_P001	Maize	cytosol	64.95	66.67
Zm00001d023657_P001	Maize	cytosol	13.4	55.32
Zm00001d038533_P001	Maize	plastid	51.03	53.8
Zm00001d008295_P002	Maize	plastid	50.0	53.59
Zm00001d043113_P001	Maize	plastid	50.52	53.55
Zm00001d005231_P006	Maize	cytosol	51.03	53.23
Zm00001d019191_P007	Maize	peroxisome	51.03	49.75
Zm00001d013007_P001	Maize	plastid	50.52	48.28
Zm00001d052978_P001	Maize	extracellular	41.75	44.02
Zm00001d017650_P002	Maize	cytosol	38.66	42.13
Zm00001d012537_P003	Maize	cytosol	42.27	40.39
Zm00001d029408_P001	Maize	endoplasmic reticulum	30.41	29.21
Zm00001d033414_P001	Maize	extracellular	36.6	27.95
Zm00001d022172_P001	Maize	golgi, peroxisome	32.99	27.23

Protein Annotations

EntrezGene:100192472	MapMan:22.3.2.1	Gene3D:3.40.50.300	ProteinID:AQK68119.1	ProteinID:AQK68120.1	UniProt:B4FBG7
EMBL:BT034455	EMBL:BT054205	EMBL:BT064617	EMBL:BT086077	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154
GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	InterPro:IPR024156	InterPro:P-loop_NTPase
PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF183	SMART:SM00175
SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR
TIGRFAMs:TIGR00231	UniParc:UPI00017B6904	EnsemblPlantsGene:Zm00001d015121	EnsemblPlants:Zm00001d015121_P002	EnsemblPlants:Zm00001d015121_T002	:

Description

ADP-ribosylation factor B1B

Coordinates

chr5:+:76470927..76474897

Molecular Weight (calculated)

21841.4 Da

IEP (calculated)

6.960

GRAVY (calculated)

-0.127

Length

194 amino acids

Sequence
(BLAST)

001: MGQALRRLFD SFFSTREMRV VMLGLDAAGK TTILYRLHMG EVLSTVPTVG FNVEKVQYKN VAFTVWDVGG QEKLRSLWKM YLSNSDALIY VVDSLDRERI
101: RDARQEFQTI IKDPLMANSI ILVFANKQDL RGTMSTDEVS EGLGLHDLRN RIWHIQGTCA LRGEGLYDGL DWLASTLKQL QESGHATSVA GPSI

Best Arabidopsis Sequence Match ( AT1G10630.1 )
(BLAST)

001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A

Arabidopsis Description

ATARFA1FADP-ribosylation factor A1F [Source:UniProtKB/TrEMBL;Acc:Q6ID97]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.