Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER96075 | Sorghum | mitochondrion | 90.95 | 100.0 |
| Zm00001d023657_P001 | Maize | cytosol | 23.62 | 100.0 |
| Os07t0223400-01 | Rice | mitochondrion | 90.95 | 100.0 |
| Os07t0223100-01 | Rice | plasma membrane | 90.95 | 100.0 |
| TraesCS2A01G235500.1 | Wheat | golgi, plastid | 90.45 | 99.45 |
| TraesCS2D01G244900.1 | Wheat | mitochondrion, peroxisome | 89.95 | 98.89 |
| AT2G47170.2 | Thale cress | mitochondrion | 89.45 | 98.34 |
| CDY41444 | Canola | mitochondrion | 88.94 | 97.79 |
| KRG93262 | Soybean | nucleus | 88.94 | 97.79 |
| KRH56584 | Soybean | mitochondrion | 88.94 | 97.79 |
| CDX91717 | Canola | mitochondrion | 88.94 | 97.79 |
| Bra016344.1-P | Field mustard | mitochondrion | 88.94 | 97.79 |
| AT1G10630.2 | Thale cress | mitochondrion | 88.94 | 97.79 |
| PGSC0003DMT400003226 | Potato | mitochondrion | 88.44 | 97.24 |
| CDY54291 | Canola | mitochondrion, peroxisome | 88.44 | 97.24 |
| CDY44152 | Canola | mitochondrion, peroxisome | 88.44 | 97.24 |
| AT1G23490.1 | Thale cress | mitochondrion, peroxisome | 88.44 | 97.24 |
| CDY25787 | Canola | mitochondrion, peroxisome | 88.44 | 97.24 |
| AT1G70490.4 | Thale cress | mitochondrion, peroxisome | 88.44 | 97.24 |
| CDY11588 | Canola | mitochondrion, peroxisome | 88.44 | 97.24 |
| CDY09441 | Canola | mitochondrion, peroxisome | 88.44 | 97.24 |
| CDY04706 | Canola | mitochondrion, peroxisome | 88.44 | 97.24 |
| CDY03747 | Canola | mitochondrion, peroxisome | 88.44 | 97.24 |
| Zm00001d005231_P006 | Maize | cytosol | 90.45 | 96.77 |
| CDY47137 | Canola | peroxisome | 87.94 | 96.69 |
| Zm00001d008295_P002 | Maize | plastid | 87.94 | 96.69 |
| Bra024604.1-P | Field mustard | mitochondrion | 87.94 | 96.69 |
| VIT_14s0066g01080.t01 | Wine grape | mitochondrion | 87.44 | 96.13 |
| Zm00001d043113_P001 | Maize | plastid | 87.94 | 95.63 |
| GSMUA_Achr7P18350_001 | Banana | cytosol | 79.4 | 95.18 |
| Zm00001d038533_P001 | Maize | plastid | 87.44 | 94.57 |
| Bra012376.1-P | Field mustard | cytosol | 87.94 | 93.09 |
| KRH36902 | Soybean | endoplasmic reticulum | 85.43 | 92.39 |
| Bra003954.1-P | Field mustard | cytosol | 81.91 | 90.06 |
| CDX68343 | Canola | cytosol | 81.91 | 89.56 |
| Zm00001d013007_P001 | Maize | plastid | 89.95 | 88.18 |
| TraesCS5B01G479100.1 | Wheat | golgi | 90.45 | 85.31 |
| CDY23500 | Canola | cytosol | 81.41 | 75.7 |
| HORVU5Hr1G111500.2 | Barley | mitochondrion | 88.94 | 75.64 |
| Zm00001d012537_P003 | Maize | cytosol | 70.35 | 68.97 |
| Zm00001d017650_P002 | Maize | cytosol | 51.26 | 57.3 |
| Zm00001d030157_P001 | Maize | extracellular | 54.77 | 56.19 |
| Zm00001d051546_P001 | Maize | cytosol | 52.76 | 54.12 |
| Zm00001d052978_P001 | Maize | extracellular | 47.74 | 51.63 |
| Zm00001d015121_P002 | Maize | mitochondrion | 49.75 | 51.03 |
| Zm00001d044868_P001 | Maize | cytosol | 47.24 | 49.74 |
| Zm00001d017717_P001 | Maize | cytosol | 52.76 | 47.51 |
| Zm00001d033414_P001 | Maize | extracellular | 45.73 | 35.83 |
| Zm00001d029408_P001 | Maize | endoplasmic reticulum | 32.66 | 32.18 |
| Zm00001d022172_P001 | Maize | golgi, peroxisome | 32.66 | 27.66 |
Protein Annotations
| EntrezGene:100280562 | EntrezGene:100280918 | MapMan:22.3.2.1 | Gene3D:3.40.50.300 | UniProt:A0A1D6HW42 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 | InterPro:IPR024156 |
| ProteinID:ONM52450.1 | InterPro:P-loop_NTPase | PFAM:PF00025 | PRINTS:PR00328 | PFscan:PS51417 | PANTHER:PTHR11711 |
| PANTHER:PTHR11711:SF215 | SMART:SM00175 | SMART:SM00177 | SMART:SM00178 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR | TIGRFAMs:TIGR00231 | UniParc:UPI000842F7E2 | EnsemblPlantsGene:Zm00001d019191 | EnsemblPlants:Zm00001d019191_P007 |
| EnsemblPlants:Zm00001d019191_T007 | : | : | : | : | : |
Description
ADP-ribosylation factor A1F
Coordinates
chr7:+:21062125..21065082
Molecular Weight (calculated)
22697.5 Da
IEP (calculated)
8.469
GRAVY (calculated)
-0.251
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MRWGICDPLC EGRGTRRKMG LAFGKLFSRL FAKKEMRILM VGLDAAGKTT ILYKLKLGEI VTTIPTIGFN VETVEYKNIS FTVWDVGGQD KIRPLWRHYF
101: QNTQGLIFVV DSNDRDRVVE ARDELHRMLN EDELRDAVLL VFANKQDLPN AMNAAEITDK LGLHSLRQRH WYIQSTCATT GEGLYEGLDW LSSNIASKA
101: QNTQGLIFVV DSNDRDRVVE ARDELHRMLN EDELRDAVLL VFANKQDLPN AMNAAEITDK LGLHSLRQRH WYIQSTCATT GEGLYEGLDW LSSNIASKA
001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A
Arabidopsis Description
ATARFA1FADP-ribosylation factor A1F [Source:UniProtKB/TrEMBL;Acc:Q6ID97]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.