CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003954.1-P	Field mustard	cytosol	98.35	98.89
CDY09441	Canola	mitochondrion, peroxisome	91.76	92.27
CDY44152	Canola	mitochondrion, peroxisome	91.76	92.27
CDY47137	Canola	peroxisome	91.76	92.27
CDY54291	Canola	mitochondrion, peroxisome	91.76	92.27
CDY25787	Canola	mitochondrion, peroxisome	91.76	92.27
CDY11588	Canola	mitochondrion, peroxisome	91.76	92.27
CDY04706	Canola	mitochondrion, peroxisome	91.76	92.27
CDY03747	Canola	mitochondrion, peroxisome	91.76	92.27
CDX91717	Canola	mitochondrion	91.21	91.71
CDY41444	Canola	mitochondrion	91.21	91.71
CDX89139	Canola	cytosol	90.66	91.16
CDY37791	Canola	cytosol	90.66	91.16
VIT_14s0066g01080.t01	Wine grape	mitochondrion	90.66	91.16
CDY51415	Canola	cytosol	90.66	91.16
CDY27506	Canola	cytosol	90.66	91.16
CDX93979	Canola	mitochondrion, peroxisome	90.66	91.16
CDX80083	Canola	cytosol	90.66	91.16
PGSC0003DMT400003226	Potato	mitochondrion	90.11	90.61
CDY47221	Canola	mitochondrion	90.11	90.61
GSMUA_Achr2P11590_001	Banana	mitochondrion	90.11	90.61
CDY53050	Canola	cytosol	90.11	90.61
TraesCS2A01G235500.1	Wheat	golgi, plastid	90.11	90.61
Os07t0223100-01	Rice	plasma membrane	89.56	90.06
Os07t0223400-01	Rice	mitochondrion	89.56	90.06
Os03t0811900-01	Rice	plasma membrane	89.56	90.06
TraesCS2D01G244900.1	Wheat	mitochondrion, peroxisome	89.56	90.06
EER93218	Sorghum	mitochondrion	89.56	90.06
EER96075	Sorghum	mitochondrion	89.56	90.06
GSMUA_Achr10P...	Banana	cytosol	81.87	89.76
GSMUA_Achr7P18350_001	Banana	cytosol	81.32	89.16
Zm00001d005231_P006	Maize	cytosol	90.11	88.17
KRH36902	Soybean	endoplasmic reticulum	89.01	88.04
CDX95712	Canola	cytosol	91.21	87.37
Zm00001d023657_P001	Maize	cytosol	22.53	87.23
CDX83340	Canola	cytosol	90.66	86.39
CDX75849	Canola	cytosol	52.2	82.61
GSMUA_Achr11P...	Banana	cytosol	90.66	82.5
Zm00001d019191_P007	Maize	peroxisome	89.56	81.91
Zm00001d013007_P001	Maize	plastid	89.56	80.3
CDX69567	Canola	mitochondrion	90.66	80.1
CDY23500	Canola	cytosol	93.41	79.44
CDY09875	Canola	mitochondrion	90.66	77.46
TraesCS5D01G480200.1	Wheat	unclear	89.56	77.25
TraesCS5B01G479100.1	Wheat	golgi	89.56	77.25
TraesCS5A01G467400.1	Wheat	cytosol	89.56	77.25
HORVU5Hr1G111500.2	Barley	mitochondrion	89.56	69.66
GSMUA_Achr3P18390_001	Banana	plasma membrane	92.31	69.42
Zm00001d012537_P003	Maize	cytosol	70.33	63.05
CDX68781	Canola	cytosol	58.79	58.79
CDX75192	Canola	cytosol	58.79	58.79
CDY34756	Canola	cytosol	58.24	58.24
CDY45596	Canola	cytosol	58.24	58.24
CDX76793	Canola	cytosol	58.24	58.24
CDY36172	Canola	cytosol	56.04	56.04
CDY48224	Canola	mitochondrion	60.99	54.15
CDY28739	Canola	cytosol	56.04	53.12
CDY43149	Canola	cytosol	56.04	53.12
CDY23463	Canola	cytosol	56.04	53.12
CDX71216	Canola	mitochondrion	60.99	53.11
CDY16963	Canola	cytosol	55.49	52.6
CDX69406	Canola	cytosol	55.49	52.6
GSMUA_Achr6P08570_001	Banana	cytosol	90.66	51.4
CDY29751	Canola	cytosol	51.1	50.82
CDY36874	Canola	cytosol	51.1	50.82
CDY53727	Canola	cytosol	51.1	50.82
CDY16265	Canola	cytosol	51.1	50.82
CDY29231	Canola	cytosol	43.96	43.24
CDY36479	Canola	cytosol	43.96	43.24
CDY25962	Canola	mitochondrion	53.3	35.02
CDY13039	Canola	cytosol	43.96	32.65
CDY38908	Canola	cytosol	35.71	31.71
CDY31913	Canola	cytosol	35.16	31.07
CDY00519	Canola	cytosol	35.16	31.07
CDY32591	Canola	cytosol	35.71	25.69

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:A0A078BZP2	EnsemblPlants:CDX68343	ProteinID:CDX68343	ProteinID:CDX68343.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	EnsemblPlantsGene:GSBRNA2T00099645001	InterPro:IPR024156	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328
PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF182	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI0004EDC906	:

Description

BnaA07g23830D

Coordinates

chrLK031787:+:5117724..5118759

Molecular Weight (calculated)

20700.1 Da

IEP (calculated)

6.800

GRAVY (calculated)

-0.146

Length

182 amino acids

Sequence
(BLAST)

001: MGLGFAKLVS SLFAKKEMRL LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYRN ISFTVWDVGG QDKIRPLWKY YFQNTQGLIF VVDSNDRDRI
101: AEARDELHRM LNEDELRDAV LLVFANKQDL PIAMNAAEIT DKLGLHTLRQ RHWYIQSTCA TSGEGLYEGL EWLSNNIRGK VT

Best Arabidopsis Sequence Match ( AT1G70490.1 )
(BLAST)

001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIAGK A

Arabidopsis Description

ARF2-AADP-ribosylation factor 2-B [Source:UniProtKB/Swiss-Prot;Acc:P0DH91]
SUBAcon: [mitochondrion,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.