CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400065739	Potato	mitochondrion	84.04	98.89
CDX69567	Canola	mitochondrion	95.31	98.54
CDX93979	Canola	mitochondrion, peroxisome	83.57	98.34
CDY03747	Canola	mitochondrion, peroxisome	83.1	97.79
CDY37791	Canola	cytosol	83.1	97.79
CDY41444	Canola	mitochondrion	83.1	97.79
CDY44152	Canola	mitochondrion, peroxisome	83.1	97.79
CDY27506	Canola	cytosol	83.1	97.79
CDY25787	Canola	mitochondrion, peroxisome	83.1	97.79
CDY47221	Canola	mitochondrion	83.1	97.79
CDY51415	Canola	cytosol	83.1	97.79
CDY54291	Canola	mitochondrion, peroxisome	83.1	97.79
CDY11588	Canola	mitochondrion, peroxisome	83.1	97.79
CDY09441	Canola	mitochondrion, peroxisome	83.1	97.79
CDY04706	Canola	mitochondrion, peroxisome	83.1	97.79
CDX91717	Canola	mitochondrion	83.1	97.79
CDX89139	Canola	cytosol	83.1	97.79
CDX80083	Canola	cytosol	83.1	97.79
KRH31758	Soybean	mitochondrion	84.04	97.28
CDY53050	Canola	cytosol	82.63	97.24
CDY47137	Canola	peroxisome	82.63	97.24
CDX95712	Canola	cytosol	84.04	94.21
KRH74584	Soybean	nucleus	84.04	94.21
CDX83340	Canola	cytosol	83.57	93.19
CDX68343	Canola	cytosol	77.46	90.66
CDX75849	Canola	cytosol	47.89	88.7
Solyc01g008000.2.1	Tomato	plastid, unclear	84.04	85.65
KRH69176	Soybean	endoplasmic reticulum	84.04	80.27
CDY23500	Canola	cytosol	77.46	77.1
CDX68781	Canola	cytosol	51.64	60.44
CDX75192	Canola	cytosol	51.64	60.44
CDX76793	Canola	cytosol	51.17	59.89
CDY34756	Canola	cytosol	51.17	59.89
CDY45596	Canola	cytosol	51.17	59.89
CDY48224	Canola	mitochondrion	56.81	59.02
CDX71216	Canola	mitochondrion	56.81	57.89
CDY36172	Canola	cytosol	49.3	57.69
CDY28739	Canola	cytosol	49.77	55.21
CDY16963	Canola	cytosol	49.77	55.21
CDY23463	Canola	cytosol	49.77	55.21
CDY43149	Canola	cytosol	49.77	55.21
CDX69406	Canola	cytosol	49.77	55.21
CDY29751	Canola	cytosol	44.6	51.91
CDY36874	Canola	cytosol	44.6	51.91
CDY16265	Canola	cytosol	44.6	51.91
CDY53727	Canola	cytosol	44.6	51.91
CDY29231	Canola	cytosol	39.91	45.95
CDY36479	Canola	cytosol	39.91	45.95
CDY13039	Canola	cytosol	39.91	34.69
CDY25962	Canola	mitochondrion	45.07	34.66
CDY38908	Canola	cytosol	29.58	30.73
CDY00519	Canola	cytosol	29.58	30.58
CDY31913	Canola	cytosol	29.58	30.58
CDY32591	Canola	cytosol	29.58	24.9

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:A0A078F5X0	UniProt:A0A078F5X0	EnsemblPlants:CDY09875	ProteinID:CDY09875
ProteinID:CDY09875.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00031626001	InterPro:IPR024156	InterPro:P-loop_NTPase
PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF182	SMART:SM00175
SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR
TIGRFAMs:TIGR00231	TMHMM:TMhelix	UniParc:UPI0004EE11BC	:	:	:

Description

BnaC09g42860DBnaC09g42860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F5X0]

Coordinates

chrLK031999:+:750170..752339

Molecular Weight (calculated)

24336.5 Da

IEP (calculated)

6.679

GRAVY (calculated)

0.019

Length

213 amino acids

Sequence
(BLAST)

001: MGLNFTKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIANK IVCSSPYANS GDDSIFIHVI
201: VFIFMLIKTF ILI

Best Arabidopsis Sequence Match ( AT5G14670.1 )
(BLAST)

Arabidopsis Description

ATARFA1BADP-ribosylation factor A1B [Source:UniProtKB/TrEMBL;Acc:Q9LYJ3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.