Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029132.1-P | Field mustard | cytosol | 79.45 | 100.0 |
| CDY38908 | Canola | cytosol | 81.03 | 100.0 |
| CDY31913 | Canola | cytosol | 77.08 | 94.66 |
| CDY00519 | Canola | cytosol | 77.08 | 94.66 |
| AT5G52210.2 | Thale cress | cytosol | 76.28 | 94.15 |
| Solyc10g074630.1.1 | Tomato | cytosol | 61.26 | 80.31 |
| VIT_00s0215g00070.t01 | Wine grape | endoplasmic reticulum | 63.24 | 78.05 |
| KRH11380 | Soybean | endoplasmic reticulum | 62.85 | 77.94 |
| KRH20906 | Soybean | endoplasmic reticulum | 62.06 | 76.96 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 61.66 | 76.85 |
| GSMUA_Achr5P00190_001 | Banana | extracellular | 60.87 | 75.86 |
| Os03t0392300-01 | Rice | cytosol | 57.31 | 71.43 |
| EER99714 | Sorghum | cytosol | 56.92 | 70.94 |
| TraesCS1A01G069400.1 | Wheat | peroxisome | 56.13 | 69.95 |
| Os07t0620400-01 | Rice | cytosol | 56.13 | 69.95 |
| TraesCS1B01G087700.1 | Wheat | peroxisome | 55.73 | 69.8 |
| TraesCS1D01G072000.1 | Wheat | peroxisome | 55.73 | 69.46 |
| Zm00001d029408_P001 | Maize | endoplasmic reticulum | 54.55 | 68.32 |
| HORVU1Hr1G014610.1 | Barley | cytosol | 54.55 | 67.98 |
| VIT_19s0027g00160.t01 | Wine grape | cytosol, extracellular | 35.18 | 67.94 |
| EER94751 | Sorghum | cytosol | 54.15 | 67.82 |
| VIT_00s0189g00080.t01 | Wine grape | cytosol | 39.92 | 67.79 |
| TraesCS2D01G172000.1 | Wheat | peroxisome | 49.8 | 63.32 |
| Zm00001d022172_P001 | Maize | golgi, peroxisome | 56.52 | 60.85 |
| PGSC0003DMT400043326 | Potato | cytosol | 56.52 | 60.34 |
| TraesCS2B01G191100.2 | Wheat | cytosol, plastid | 47.04 | 55.61 |
| CDX68343 | Canola | cytosol | 25.69 | 35.71 |
| CDX75192 | Canola | cytosol | 25.3 | 35.16 |
| CDX68781 | Canola | cytosol | 25.3 | 35.16 |
| CDX80083 | Canola | cytosol | 24.9 | 34.81 |
| CDX89139 | Canola | cytosol | 24.9 | 34.81 |
| CDX91717 | Canola | mitochondrion | 24.9 | 34.81 |
| CDX93979 | Canola | mitochondrion, peroxisome | 24.9 | 34.81 |
| CDY47221 | Canola | mitochondrion | 24.9 | 34.81 |
| CDY54291 | Canola | mitochondrion, peroxisome | 24.9 | 34.81 |
| CDY53050 | Canola | cytosol | 24.9 | 34.81 |
| CDY51415 | Canola | cytosol | 24.9 | 34.81 |
| CDY04706 | Canola | mitochondrion, peroxisome | 24.9 | 34.81 |
| CDY47137 | Canola | peroxisome | 24.9 | 34.81 |
| CDY44152 | Canola | mitochondrion, peroxisome | 24.9 | 34.81 |
| CDY09441 | Canola | mitochondrion, peroxisome | 24.9 | 34.81 |
| CDY41444 | Canola | mitochondrion | 24.9 | 34.81 |
| CDY27506 | Canola | cytosol | 24.9 | 34.81 |
| CDY37791 | Canola | cytosol | 24.9 | 34.81 |
| CDY25787 | Canola | mitochondrion, peroxisome | 24.9 | 34.81 |
| CDY11588 | Canola | mitochondrion, peroxisome | 24.9 | 34.81 |
| CDY03747 | Canola | mitochondrion, peroxisome | 24.9 | 34.81 |
| CDX76793 | Canola | cytosol | 24.51 | 34.07 |
| CDY34756 | Canola | cytosol | 24.51 | 34.07 |
| CDY45596 | Canola | cytosol | 24.51 | 34.07 |
| CDY36479 | Canola | cytosol | 24.9 | 34.05 |
| CDY29231 | Canola | cytosol | 24.9 | 34.05 |
| CDY36874 | Canola | cytosol | 24.11 | 33.33 |
| CDX95712 | Canola | cytosol | 24.9 | 33.16 |
| CDX75849 | Canola | cytosol | 15.02 | 33.04 |
| CDY53727 | Canola | cytosol | 23.72 | 32.79 |
| CDY16265 | Canola | cytosol | 23.72 | 32.79 |
| CDX83340 | Canola | cytosol | 24.51 | 32.46 |
| CDY36172 | Canola | cytosol | 23.32 | 32.42 |
| CDY29751 | Canola | cytosol | 23.32 | 32.24 |
| CDY23500 | Canola | cytosol | 26.48 | 31.31 |
| CDX69406 | Canola | cytosol | 23.72 | 31.25 |
| CDY16963 | Canola | cytosol | 23.72 | 31.25 |
| CDY23463 | Canola | cytosol | 23.32 | 30.73 |
| CDX69567 | Canola | mitochondrion | 24.9 | 30.58 |
| CDY28739 | Canola | cytosol | 22.92 | 30.21 |
| CDY43149 | Canola | cytosol | 22.92 | 30.21 |
| CDY09875 | Canola | mitochondrion | 24.9 | 29.58 |
| CDY48224 | Canola | mitochondrion | 22.13 | 27.32 |
| CDX71216 | Canola | mitochondrion | 22.13 | 26.79 |
| CDY13039 | Canola | cytosol | 24.9 | 25.71 |
| CDY25962 | Canola | mitochondrion | 15.41 | 14.08 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | GO:A0A078H461 | UniProt:A0A078H461 | EnsemblPlants:CDY32591 | ProteinID:CDY32591 |
| ProteinID:CDY32591.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00052607001 | InterPro:IPR024156 | InterPro:P-loop_NTPase | PFAM:PF00025 | PRINTS:PR00328 |
| PFscan:PS51417 | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF218 | SMART:SM00175 | SMART:SM00177 | SMART:SM00178 |
| SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR | TIGRFAMs:TIGR00231 | UniParc:UPI0004EE5471 |
Description
BnaC03g15590DBnaC03g15590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H461]
Coordinates
chrLK032297:-:53155..54997
Molecular Weight (calculated)
28962.8 Da
IEP (calculated)
5.737
GRAVY (calculated)
-0.282
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MWILIDTWDD WIESKKKTDN NRVECKNDSS QLAKGSLIFL LQNRLEEVMF SLMHGLWSYM FSKTEFHVLI LGIDKAGKTT FLEKLKTIYS ISEGLPHDRI
101: VPTVGLNIGR IEVSNAKIVF WDLGGQPGLR SIWEKYYEEA HALIYLIDAA CPSRFEESKS ALEKALRHED LQGAPLLILA NKQDLSNAVS AEELDRYLDL
201: KKLDERVYMF EPVSGYDGRG IKESVEWLVG VMERSKRTET LRARTGYVPV PSS
101: VPTVGLNIGR IEVSNAKIVF WDLGGQPGLR SIWEKYYEEA HALIYLIDAA CPSRFEESKS ALEKALRHED LQGAPLLILA NKQDLSNAVS AEELDRYLDL
201: KKLDERVYMF EPVSGYDGRG IKESVEWLVG VMERSKRTET LRARTGYVPV PSS
001: MFSLMSGLWS YMFSKTEFNV LILGIDKAGK TTFLEKLKTI YSISEGLPHD RIVPTVGLNI GRIEVSNAKI VFWDLGGQPG LRSIWEKYYE EAHALIYLID
101: AACPTRFEDS KSALEKALRH EDLQGAPLLI LANKQDLTNA VSAEELDRYL DLKKLDERVY MFEAVSGYDG RGIKESIEWL VGVMEKSKRT ESLRARAGYT
201: PVPNS
101: AACPTRFEDS KSALEKALRH EDLQGAPLLI LANKQDLTNA VSAEELDRYL DLKKLDERVY MFEAVSGYDG RGIKESIEWL VGVMEKSKRT ESLRARAGYT
201: PVPNS
Arabidopsis Description
ATARLB1At5g52210 [Source:UniProtKB/TrEMBL;Acc:Q38921]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.