CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 4
extracellular 4
mitochondrion 1
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
EpiLoc:	extracellular
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11380	Soybean	endoplasmic reticulum	98.04	98.04
VIT_00s0215g00070.t01	Wine grape	endoplasmic reticulum	80.39	80.0
Solyc10g074630.1.1	Tomato	cytosol	75.0	79.27
GSMUA_Achr11P...	Banana	endoplasmic reticulum	77.94	78.33
CDY31913	Canola	cytosol	78.92	78.16
CDY00519	Canola	cytosol	78.43	77.67
Bra028298.1-P	Field mustard	cytosol	76.47	77.61
CDY38908	Canola	cytosol	76.96	76.59
AT5G52210.2	Thale cress	cytosol	76.96	76.59
GSMUA_Achr5P00190_001	Banana	extracellular	75.98	76.35
Bra029132.1-P	Field mustard	cytosol	75.0	76.12
EER99714	Sorghum	cytosol	72.06	72.41
Os03t0392300-01	Rice	cytosol	72.06	72.41
Os07t0620400-01	Rice	cytosol	70.1	70.44
VIT_00s0189g00080.t01	Wine grape	cytosol	50.98	69.8
VIT_19s0027g00160.t01	Wine grape	cytosol, extracellular	44.61	69.47
Zm00001d029408_P001	Maize	endoplasmic reticulum	68.14	68.81
EER94751	Sorghum	cytosol	68.14	68.81
TraesCS1A01G069400.1	Wheat	peroxisome	67.16	67.49
TraesCS1D01G072000.1	Wheat	peroxisome	66.67	67.0
TraesCS1B01G087700.1	Wheat	peroxisome	65.69	66.34
HORVU1Hr1G014610.1	Barley	cytosol	65.69	66.01
Zm00001d022172_P001	Maize	golgi, peroxisome	72.06	62.55
TraesCS2D01G172000.1	Wheat	peroxisome	60.78	62.31
CDY32591	Canola	cytosol	76.96	62.06
PGSC0003DMT400043326	Potato	cytosol	70.1	60.34
TraesCS2B01G191100.2	Wheat	cytosol, plastid	57.84	55.14
KRH18982	Soybean	endoplasmic reticulum	32.84	38.95
KRH33780	Soybean	mitochondrion, peroxisome	33.82	38.12
KRG90489	Soybean	mitochondrion	33.33	37.57
KRH45651	Soybean	mitochondrion	33.33	37.57
KRH56584	Soybean	mitochondrion	33.33	37.57
KRH69574	Soybean	endoplasmic reticulum, nucleus	33.33	37.57
KRG96566	Soybean	mitochondrion	33.33	37.57
KRG99354	Soybean	mitochondrion	33.33	37.57
KRG93262	Soybean	nucleus	33.33	37.57
KRH36902	Soybean	endoplasmic reticulum	33.82	37.5
KRH31758	Soybean	mitochondrion	33.33	36.96
KRH28677	Soybean	cytosol	33.33	36.76
KRH76824	Soybean	cytosol	33.33	36.76
KRH02913	Soybean	cytosol	28.92	35.54
KRH74584	Soybean	nucleus	32.84	35.26
KRH77051	Soybean	mitochondrion	31.37	35.16
KRG92448	Soybean	endoplasmic reticulum	30.88	34.43
KRG92441	Soybean	endoplasmic reticulum	30.88	34.43
KRH34351	Soybean	endoplasmic reticulum	30.88	34.43
KRH24049	Soybean	cytosol	29.9	31.28
KRH77702	Soybean	cytosol	26.96	31.25
KRH27742	Soybean	cytosol	29.41	31.09
KRH34356	Soybean	cytosol, extracellular	21.08	30.94
KRH29023	Soybean	cytosol	29.41	30.77
KRH69176	Soybean	endoplasmic reticulum	33.33	30.49
KRH07000	Soybean	extracellular, golgi	16.18	27.27

Protein Annotations

EntrezGene:100809354	Gene3D:3.40.50.300	MapMan:35.1	EMBL:ACUP02008327	EnsemblPlantsGene:GLYMA_13G208600	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	UniProt:I1M146
InterPro:IPR024156	EnsemblPlants:KRH20906	ProteinID:KRH20906	ProteinID:KRH20906.1	ProteinID:KRH20907.1	ProteinID:KRH20908.1
ProteinID:KRH20909.1	ProteinID:KRH20910.1	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417
PANTHER:PTHR11711	PANTHER:PTHR11711:SF218	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI000233BF19	SEG:seg

Description

hypothetical protein

Coordinates

chr13:+:32257329..32261574

Molecular Weight (calculated)

22969.0 Da

IEP (calculated)

5.158

GRAVY (calculated)

-0.059

Length

204 amino acids

Sequence
(BLAST)

001: MFSLFYGLWK YLFSKMELHV LILGIDKAGK TTLLEKMKSV YSNIEGIPPD RIIPTVGLNI GRIEVANSKL VFWDLGGQPG LRSIWEKYYE EAHAVIFVVD
101: ASCPSRFEDA KSALEKVLRH EDLQGAPLLI LANKQDIPEA VSADELPQYL DLKKLDERVF MFEAVSAYDG MGIRESAEWL VEVMERSKRT EMLRARAGAM
201: GAGP

Best Arabidopsis Sequence Match ( AT5G52210.2 )
(BLAST)

001: MFSLMSGLWS YMFSKTEFNV LILGIDKAGK TTFLEKLKTI YSISEGLPHD RIVPTVGLNI GRIEVSNAKI VFWDLGGQPG LRSIWEKYYE EAHALIYLID
101: AACPTRFEDS KSALEKALRH EDLQGAPLLI LANKQDLTNA VSAEELDRYL DLKKLDERVY MFEAVSGYDG RGIKESIEWL VGVMEKSKRT ESLRARAGYT
201: PVPNS

Arabidopsis Description

ATARLB1At5g52210 [Source:UniProtKB/TrEMBL;Acc:Q38921]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.