CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27742	Soybean	cytosol	98.3	89.64
VIT_16s0039g02240.t01	Wine grape	cytosol	92.05	83.94
PGSC0003DMT400069538	Potato	cytosol	91.48	83.42
PGSC0003DMT400001454	Potato	cytosol	91.48	83.42
AT3G03120.1	Thale cress	cytosol	90.91	83.33
KRH29023	Soybean	cytosol	92.05	83.08
KRH24049	Soybean	cytosol	91.48	82.56
AT5G17060.2	Thale cress	cytosol	89.2	81.77
CDY43149	Canola	cytosol	89.2	81.77
CDY28739	Canola	cytosol	89.2	81.77
Bra021371.1-P	Field mustard	cytosol	89.2	81.77
Bra032015.1-P	Field mustard	cytosol	89.2	81.77
CDY23463	Canola	cytosol	89.2	81.77
CDX69406	Canola	cytosol	88.07	80.73
CDY16963	Canola	cytosol	88.07	80.73
TraesCS6A01G268000.1	Wheat	cytosol	87.5	80.63
Solyc06g072800.2.1	Tomato	cytosol	60.23	80.3
Bra008579.1-P	Field mustard	cytosol	87.5	80.21
TraesCS6D01G246900.1	Wheat	cytosol	86.93	80.1
EES07411	Sorghum	cytosol	88.07	79.9
Solyc03g096910.2.1	Tomato	cytosol	59.66	79.55
Zm00001d051546_P001	Maize	cytosol	87.5	79.38
GSMUA_AchrUn_...	Banana	cytosol	80.68	76.34
GSMUA_Achr7P04780_001	Banana	cytosol	81.25	76.06
Zm00001d017717_P001	Maize	cytosol	86.93	69.23
Os02t0699300-01	Rice	cytosol, extracellular, plastid	43.75	62.1
HORVU6Hr1G067840.2	Barley	cytosol	86.93	54.84
KRH77051	Soybean	mitochondrion	56.25	54.4
KRH36902	Soybean	endoplasmic reticulum	56.82	54.35
KRH69574	Soybean	endoplasmic reticulum, nucleus	55.68	54.14
KRG90489	Soybean	mitochondrion	55.68	54.14
KRG93262	Soybean	nucleus	55.68	54.14
KRG96566	Soybean	mitochondrion	55.68	54.14
KRH56584	Soybean	mitochondrion	55.68	54.14
KRH45651	Soybean	mitochondrion	55.68	54.14
KRG99354	Soybean	mitochondrion	55.68	54.14
KRH31758	Soybean	mitochondrion	56.25	53.8
KRH33780	Soybean	mitochondrion, peroxisome	55.11	53.59
TraesCS6B01G295200.1	Wheat	plastid	74.43	53.25
KRH74584	Soybean	nucleus	57.39	53.16
KRH02913	Soybean	cytosol	48.86	51.81
KRH18982	Soybean	endoplasmic reticulum	50.57	51.74
KRH07000	Soybean	extracellular, golgi	32.39	47.11
KRH34351	Soybean	endoplasmic reticulum	47.16	45.36
KRG92448	Soybean	endoplasmic reticulum	47.16	45.36
KRG92441	Soybean	endoplasmic reticulum	47.16	45.36
KRH69176	Soybean	endoplasmic reticulum	56.25	44.39
KRH34356	Soybean	cytosol, extracellular	32.95	41.73
KRH76824	Soybean	cytosol	40.34	38.38
KRH28677	Soybean	cytosol	40.34	38.38
KRH11380	Soybean	endoplasmic reticulum	31.25	26.96
KRH20906	Soybean	endoplasmic reticulum	31.25	26.96

Protein Annotations

EntrezGene:100305554	MapMan:22.3.2.1	Gene3D:3.40.50.300	EMBL:ACUP02000681	EMBL:BT089213	UniProt:C6SVM0
EnsemblPlantsGene:GLYMA_01G229000	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150
GO:GO:0009987	InterPro:IPR024156	EnsemblPlants:KRH77702	ProteinID:KRH77702	ProteinID:KRH77702.1	InterPro:P-loop_NTPase
PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF300	SMART:SM00175
SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR
TIGRFAMs:TIGR00231	UniParc:UPI0001B1575B	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:55685816..55688913

Molecular Weight (calculated)

19842.1 Da

IEP (calculated)

8.200

GRAVY (calculated)

-0.080

Length

176 amino acids

Sequence
(BLAST)

001: MRVVMLGLDA AGKTTILYKF HIGEVLSTVP TIGFNVEKVQ YKNVIFTVWD VGGQEKLRPL WRHYFDNTDG LIYVVDSLDR ERIGKAKQEF QTIINDPFML
101: NSVILVFANK QDLRGAMTPM EVCEGLGLFD LKNRKWHIQG TCALKGDGLY EGLDWLASTL KERKAAGYSS IGTSSF

Best Arabidopsis Sequence Match ( AT1G10630.1 )
(BLAST)

001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A

Arabidopsis Description

ATARFA1FADP-ribosylation factor A1F [Source:UniProtKB/TrEMBL;Acc:Q6ID97]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.