Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- nucleus 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g096910.2.1 | Tomato | cytosol | 70.16 | 65.91 |
| EES07411 | Sorghum | cytosol | 78.23 | 50.0 |
| VIT_16s0039g02240.t01 | Wine grape | cytosol | 77.42 | 49.74 |
| TraesCS6D01G246900.1 | Wheat | cytosol | 76.61 | 49.74 |
| TraesCS6A01G268000.1 | Wheat | cytosol | 76.61 | 49.74 |
| AT5G17060.2 | Thale cress | cytosol | 76.61 | 49.48 |
| Bra008579.1-P | Field mustard | cytosol | 75.81 | 48.96 |
| Bra032015.1-P | Field mustard | cytosol | 75.81 | 48.96 |
| CDX69406 | Canola | cytosol | 75.81 | 48.96 |
| CDY16963 | Canola | cytosol | 75.81 | 48.96 |
| CDY28739 | Canola | cytosol | 75.81 | 48.96 |
| CDY43149 | Canola | cytosol | 75.81 | 48.96 |
| GSMUA_AchrUn_... | Banana | cytosol | 73.39 | 48.92 |
| Zm00001d051546_P001 | Maize | cytosol | 75.81 | 48.45 |
| AT3G03120.1 | Thale cress | cytosol | 75.0 | 48.44 |
| Bra021371.1-P | Field mustard | cytosol | 75.0 | 48.44 |
| CDY23463 | Canola | cytosol | 75.0 | 48.44 |
| Os10t0580200-01 | Rice | plasma membrane | 75.0 | 48.44 |
| GSMUA_Achr7P04780_001 | Banana | cytosol | 73.39 | 48.4 |
| KRH27742 | Soybean | cytosol | 75.0 | 48.19 |
| PGSC0003DMT400069538 | Potato | cytosol | 75.0 | 48.19 |
| PGSC0003DMT400001454 | Potato | cytosol | 75.0 | 48.19 |
| KRH24049 | Soybean | cytosol | 74.19 | 47.18 |
| KRH29023 | Soybean | cytosol | 74.19 | 47.18 |
| KRH77702 | Soybean | cytosol | 62.1 | 43.75 |
| Zm00001d017717_P001 | Maize | cytosol | 76.61 | 42.99 |
| Os02t0128600-01 | Rice | mitochondrion | 66.94 | 42.78 |
| Os06t0114200-00 | Rice | plasma membrane | 62.9 | 41.27 |
| Os07t0223100-01 | Rice | plasma membrane | 57.26 | 39.23 |
| Os07t0223400-01 | Rice | mitochondrion | 57.26 | 39.23 |
| Os03t0811900-01 | Rice | plasma membrane | 56.45 | 38.67 |
| Os01t0265100-01 | Rice | plasma membrane, plastid | 56.45 | 38.67 |
| Os01t0813400-01 | Rice | plasma membrane | 56.45 | 38.67 |
| Os05t0489600-03 | Rice | plasma membrane | 56.45 | 38.67 |
| TraesCS6B01G295200.1 | Wheat | plastid | 73.39 | 36.99 |
| Os08t0248900-01 | Rice | nucleus, plasma membrane | 50.0 | 34.07 |
| HORVU6Hr1G067840.2 | Barley | cytosol | 76.61 | 34.05 |
| Os11t0586900-02 | Rice | cytosol | 39.52 | 26.63 |
| Os02t0327100-01 | Rice | cytosol | 36.29 | 24.32 |
| Os07t0620400-01 | Rice | cytosol | 33.87 | 20.69 |
| Os03t0392300-01 | Rice | cytosol | 31.45 | 19.21 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | EMBL:AK067761 | ProteinID:BAF09743.1 | ProteinID:BAS80444.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| InterPro:IPR024156 | EnsemblPlantsGene:Os02g0699300 | EnsemblPlants:Os02t0699300-01 | InterPro:P-loop_NTPase | PFAM:PF00025 | PRINTS:PR00328 |
| PFscan:PS51417 | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF300 | UniProt:Q0DYE5 | SMART:SM00177 | SUPFAM:SSF52540 |
| InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR | TIGRFAMs:TIGR00231 | UniParc:UPI0000DF081E | : |
Description
ADP-RIBOSYLATION FACTOR B1DSimilar to ADP-ribosylation factor-like protein. (Os02t0699300-01)
Coordinates
chr2:+:28755172..28758544
Molecular Weight (calculated)
14430.8 Da
IEP (calculated)
9.885
GRAVY (calculated)
0.186
Length
124 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQAFRKLFD AFFGTSEMRV VMLGLDAAGK TTILYKLHIG EVLSTVPTIG FNVEKVQYKN VMFTVWDVGG QEKLRPLWRH YFNNTDGLVC FVSFVVIFLG
101: IRERFVHRCI KEGKKWLFDF DRLV
101: IRERFVHRCI KEGKKWLFDF DRLV
001: MGQTFRKLFD TFFGNQEMRV VMLGLDAAGK TTILYKLHIG EVLSTVPTIG FNVEKVQYKN VIFTVWDVGG QEKLRPLWRH YFNNTDGLIY VVDSLDRERI
101: GKAKQEFQDI IRDPFMLNSV ILVFANKQDM RGAMSPREVC EGLGLLDLKN RKWHIQGTCA LQGDGLYEGL DWLSATLKEV KAAGYSSVGP SF
101: GKAKQEFQDI IRDPFMLNSV ILVFANKQDM RGAMSPREVC EGLGLLDLKN RKWHIQGTCA LQGDGLYEGL DWLSATLKEV KAAGYSSVGP SF
Arabidopsis Description
ATARFB1CATARFB1C [Source:UniProtKB/TrEMBL;Acc:A0A178VH47]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.