Factsheet for Os03t0811900-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 3
mitochondrion 5
peroxisome 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 19502382

msms PMID: 19502382 doi

M Fujiwara, S Hamada, M Hiratsuka, Y Fukao, T Kawasaki, K Shimamoto

Laboratory of Plant Protein Analysis, Plant Education Unit, Nara Institute of Science and Technology, Takayama, Ikoma, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0223400-01	Rice	mitochondrion	98.89	98.89
Os07t0223100-01	Rice	plasma membrane	98.89	98.89
Os01t0265100-01	Rice	plasma membrane, plastid	98.89	98.89
Os01t0813400-01	Rice	plasma membrane	98.34	98.34
KRH56584	Soybean	mitochondrion	98.34	98.34
KRG93262	Soybean	nucleus	98.34	98.34
AT1G10630.2	Thale cress	mitochondrion	97.79	97.79
AT2G47170.2	Thale cress	mitochondrion	97.79	97.79
PGSC0003DMT400003226	Potato	mitochondrion	97.79	97.79
Os05t0489600-03	Rice	plasma membrane	97.79	97.79
AT1G23490.1	Thale cress	mitochondrion, peroxisome	97.24	97.24
VIT_14s0066g01080.t01	Wine grape	mitochondrion	97.24	97.24
CDY54291	Canola	mitochondrion, peroxisome	97.24	97.24
CDY44152	Canola	mitochondrion, peroxisome	97.24	97.24
CDY41444	Canola	mitochondrion	97.24	97.24
CDY03747	Canola	mitochondrion, peroxisome	97.24	97.24
Bra016344.1-P	Field mustard	mitochondrion	97.24	97.24
AT1G70490.4	Thale cress	mitochondrion, peroxisome	97.24	97.24
CDX91717	Canola	mitochondrion	97.24	97.24
CDY04706	Canola	mitochondrion, peroxisome	97.24	97.24
CDY09441	Canola	mitochondrion, peroxisome	97.24	97.24
CDY11588	Canola	mitochondrion, peroxisome	97.24	97.24
CDY25787	Canola	mitochondrion, peroxisome	97.24	97.24
CDY47137	Canola	peroxisome	96.69	96.69
Bra024604.1-P	Field mustard	mitochondrion	96.69	96.69
Bra012376.1-P	Field mustard	cytosol	96.69	93.09
KRH36902	Soybean	endoplasmic reticulum	93.37	91.85
Bra003954.1-P	Field mustard	cytosol	90.06	90.06
CDX68343	Canola	cytosol	90.06	89.56
TraesCS5B01G479100.1	Wheat	golgi	98.89	84.83
HORVU5Hr1G111500.2	Barley	mitochondrion	98.89	76.5
CDY23500	Canola	cytosol	89.5	75.7
Os08t0248900-01	Rice	nucleus, plasma membrane	61.88	61.54
Os02t0699300-01	Rice	cytosol, extracellular, plastid	38.67	56.45
Os10t0580200-01	Rice	plasma membrane	59.67	56.25
Os11t0586900-02	Rice	cytosol	54.7	53.8
Os02t0128600-01	Rice	mitochondrion	55.25	51.55
Os06t0114200-00	Rice	plasma membrane	53.04	50.79
Os02t0327100-01	Rice	cytosol	49.17	48.11
Os03t0392300-01	Rice	cytosol	35.91	32.02
Os07t0620400-01	Rice	cytosol	34.81	31.03

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	EntrezGene:4334545	ProteinID:AAP73857.1	ProteinID:ABF99500.1	ProteinID:ABF99501.1
ProteinID:ABF99504.1	ProteinID:BAF13590.1	ProteinID:BAS87011.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	InterPro:IPR024156
EnsemblPlantsGene:Os03g0811900	EnsemblPlants:Os03t0811900-01	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417
PANTHER:PTHR11711	PANTHER:PTHR11711:SF215	UniProt:Q7XZG0	SMART:SM00175	SMART:SM00177	SMART:SM00178
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI00001AA3E1
RefSeq:XP_015632514.1	:	:	:	:	:

Description

ADP-ribosylation factor 2B, ADP-ribosylation factor A1fSimilar to ADP-ribosylation factor. (Os03t0811900-01)

Coordinates

chr3:+:34006999..34009631

Molecular Weight (calculated)

20654.9 Da

IEP (calculated)

6.960

GRAVY (calculated)

-0.191

Length

181 amino acids

Sequence
(BLAST)

001: MGLTFTKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TTGEGLYEGL DWLSSNIASK A

Best Arabidopsis Sequence Match ( AT1G10630.1 )
(BLAST)

001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A

Arabidopsis Description

ATARFA1FADP-ribosylation factor A1F [Source:UniProtKB/TrEMBL;Acc:Q6ID97]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.