Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- plastid 1
- cytosol 4
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER99714 | Sorghum | cytosol | 89.16 | 89.16 |
| TraesCS1A01G069400.1 | Wheat | peroxisome | 83.74 | 83.74 |
| TraesCS1B01G087700.1 | Wheat | peroxisome | 83.25 | 83.66 |
| TraesCS1D01G072000.1 | Wheat | peroxisome | 83.25 | 83.25 |
| HORVU1Hr1G014610.1 | Barley | cytosol | 82.76 | 82.76 |
| Os03t0392300-01 | Rice | cytosol | 79.8 | 79.8 |
| TraesCS2D01G172000.1 | Wheat | peroxisome | 76.35 | 77.89 |
| Zm00001d022172_P001 | Maize | golgi, peroxisome | 89.66 | 77.45 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 73.4 | 73.4 |
| GSMUA_Achr5P00190_001 | Banana | extracellular | 72.91 | 72.91 |
| KRH11380 | Soybean | endoplasmic reticulum | 71.43 | 71.08 |
| CDY00519 | Canola | cytosol | 71.92 | 70.87 |
| CDY31913 | Canola | cytosol | 71.92 | 70.87 |
| Bra028298.1-P | Field mustard | cytosol | 69.95 | 70.65 |
| Solyc10g074630.1.1 | Tomato | cytosol | 67.0 | 70.47 |
| VIT_00s0215g00070.t01 | Wine grape | endoplasmic reticulum | 70.94 | 70.24 |
| KRH20906 | Soybean | endoplasmic reticulum | 70.44 | 70.1 |
| CDY38908 | Canola | cytosol | 69.95 | 69.27 |
| AT5G52210.2 | Thale cress | cytosol | 69.46 | 68.78 |
| Bra029132.1-P | Field mustard | cytosol | 67.98 | 68.66 |
| TraesCS2B01G191100.2 | Wheat | cytosol, plastid | 70.94 | 67.29 |
| VIT_19s0027g00160.t01 | Wine grape | cytosol, extracellular | 40.89 | 63.36 |
| VIT_00s0189g00080.t01 | Wine grape | cytosol | 41.87 | 57.05 |
| CDY32591 | Canola | cytosol | 69.95 | 56.13 |
| PGSC0003DMT400043326 | Potato | cytosol | 62.56 | 53.59 |
| Os01t0265100-01 | Rice | plasma membrane, plastid | 31.53 | 35.36 |
| Os11t0586900-02 | Rice | cytosol | 32.02 | 35.33 |
| Os07t0223400-01 | Rice | mitochondrion | 31.03 | 34.81 |
| Os07t0223100-01 | Rice | plasma membrane | 31.03 | 34.81 |
| Os03t0811900-01 | Rice | plasma membrane | 31.03 | 34.81 |
| Os01t0813400-01 | Rice | plasma membrane | 30.54 | 34.25 |
| Os05t0489600-03 | Rice | plasma membrane | 30.54 | 34.25 |
| Os02t0699300-01 | Rice | cytosol, extracellular, plastid | 20.69 | 33.87 |
| Os08t0248900-01 | Rice | nucleus, plasma membrane | 30.05 | 33.52 |
| Os02t0128600-01 | Rice | mitochondrion | 32.02 | 33.51 |
| Os10t0580200-01 | Rice | plasma membrane | 31.03 | 32.81 |
| Os02t0327100-01 | Rice | cytosol | 29.06 | 31.89 |
| Os06t0114200-00 | Rice | plasma membrane | 29.06 | 31.22 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | EntrezGene:4343932 | EMBL:AK099524 | ProteinID:BAC79918.1 | ProteinID:BAF22214.1 |
| ProteinID:BAT02689.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR024156 | EnsemblPlantsGene:Os07g0620400 |
| EnsemblPlants:Os07t0620400-01 | InterPro:P-loop_NTPase | PFAM:PF00025 | PRINTS:PR00328 | PFscan:PS51417 | PANTHER:PTHR11711 |
| PANTHER:PTHR11711:SF218 | UniProt:Q7XI38 | SMART:SM00175 | SMART:SM00177 | SMART:SM00178 | SUPFAM:SSF52540 |
| InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR | TIGRFAMs:TIGR00231 | UniParc:UPI00001B3A97 | RefSeq:XP_015647048.1 |
Description
GTP-BINDING PROTEIN 1BSimilar to GTP-binding protein-like. (Os07t0620400-01)
Coordinates
chr7:-:25645996..25649158
Molecular Weight (calculated)
22903.6 Da
IEP (calculated)
5.812
GRAVY (calculated)
-0.142
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSLFYGLWQ HVFSKAEFHV VILGVHKAGK TTLLEKVKSI YLKEEGLPHD RIVPTVGLNI GRIEDANVKL VFWDLGGQPG LRTIWEKYYE EAHAVIYVID
101: SAAASSFEDA KSALEKVLHH EDLQGVPLLI FANKQELPAA VTEEELARHL HLKGLDERPY MFQAGSAYDG TGIKAGIDWL VEEMERSKRT EVLMARTETA
201: EKI
101: SAAASSFEDA KSALEKVLHH EDLQGVPLLI FANKQELPAA VTEEELARHL HLKGLDERPY MFQAGSAYDG TGIKAGIDWL VEEMERSKRT EVLMARTETA
201: EKI
001: MFSLMSGLWS YMFSKTEFNV LILGIDKAGK TTFLEKLKTI YSISEGLPHD RIVPTVGLNI GRIEVSNAKI VFWDLGGQPG LRSIWEKYYE EAHALIYLID
101: AACPTRFEDS KSALEKALRH EDLQGAPLLI LANKQDLTNA VSAEELDRYL DLKKLDERVY MFEAVSGYDG RGIKESIEWL VGVMEKSKRT ESLRARAGYT
201: PVPNS
101: AACPTRFEDS KSALEKALRH EDLQGAPLLI LANKQDLTNA VSAEELDRYL DLKKLDERVY MFEAVSGYDG RGIKESIEWL VGVMEKSKRT ESLRARAGYT
201: PVPNS
Arabidopsis Description
ATARLB1At5g52210 [Source:UniProtKB/TrEMBL;Acc:Q38921]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.