Factsheet for Bra028298.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
mitochondrion 2
cytosol 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00519	Canola	cytosol	100.0	97.57
Bra029132.1-P	Field mustard	cytosol	95.02	95.02
AT5G52210.2	Thale cress	cytosol	94.03	92.2
Solyc10g074630.1.1	Tomato	cytosol	76.12	79.27
KRH11380	Soybean	endoplasmic reticulum	78.61	77.45
KRH20906	Soybean	endoplasmic reticulum	77.61	76.47
GSMUA_Achr11P...	Banana	endoplasmic reticulum	76.62	75.86
VIT_00s0215g00070.t01	Wine grape	endoplasmic reticulum	77.11	75.61
GSMUA_Achr5P00190_001	Banana	extracellular	75.62	74.88
Os03t0392300-01	Rice	cytosol	72.14	71.43
TraesCS1A01G069400.1	Wheat	peroxisome	71.14	70.44
EER99714	Sorghum	cytosol	71.14	70.44
Os07t0620400-01	Rice	cytosol	70.65	69.95
TraesCS1D01G072000.1	Wheat	peroxisome	70.65	69.95
TraesCS1B01G087700.1	Wheat	peroxisome	69.65	69.31
HORVU1Hr1G014610.1	Barley	cytosol	69.15	68.47
VIT_00s0189g00080.t01	Wine grape	cytosol	50.75	68.46
Zm00001d029408_P001	Maize	endoplasmic reticulum	68.16	67.82
EER94751	Sorghum	cytosol	67.66	67.33
VIT_19s0027g00160.t01	Wine grape	cytosol, extracellular	42.79	65.65
TraesCS2D01G172000.1	Wheat	peroxisome	63.18	63.82
Zm00001d022172_P001	Maize	golgi, peroxisome	70.65	60.43
PGSC0003DMT400043326	Potato	cytosol	69.15	58.65
TraesCS2B01G191100.2	Wheat	cytosol, plastid	61.69	57.94
Bra003954.1-P	Field mustard	cytosol	30.85	34.25
Bra032062.1-P	Field mustard	cytosol	30.85	34.07
Bra007833.1-P	Field mustard	cytosol	30.85	34.07
Bra011295.1-P	Field mustard	cytosol	30.85	34.07
Bra014403.1-P	Field mustard	cytosol	30.35	33.7
Bra004475.1-P	Field mustard	cytosol	30.35	33.7
Bra027153.1-P	Field mustard	cytosol	30.35	33.7
Bra016215.1-P	Field mustard	cytosol	30.35	33.7
Bra016344.1-P	Field mustard	mitochondrion	30.35	33.7
Bra021387.1-P	Field mustard	cytosol	30.35	33.7
Bra024604.1-P	Field mustard	mitochondrion	30.35	33.7
Bra039613.1-P	Field mustard	cytosol	30.85	33.51
Bra012376.1-P	Field mustard	cytosol	31.34	33.51
Bra024470.1-P	Field mustard	cytosol	30.35	32.97
Bra039725.1-P	Field mustard	cytosol	29.85	32.79
Bra008746.1-P	Field mustard	mitochondrion	30.35	32.28
Bra036878.1-P	Field mustard	cytosol	29.35	32.24
Bra000443.1-P	Field mustard	cytosol	30.35	31.77
Bra008579.1-P	Field mustard	cytosol	29.35	30.73
Bra032015.1-P	Field mustard	cytosol	28.86	30.21
Bra021371.1-P	Field mustard	cytosol	28.86	30.21
Bra007917.1-P	Field mustard	cytosol	21.89	29.33
Bra036410.1-P	Field mustard	mitochondrion	26.37	12.62

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	EnsemblPlantsGene:Bra028298	EnsemblPlants:Bra028298.1	EnsemblPlants:Bra028298.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	InterPro:IPR024156
UniProt:M4EHN3	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF218	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI00025439C8	:	:

Description

AT5G52210 (E=5e-107) ATARLB1, ATGB1 | ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1); GTP binding

Coordinates

chrA01:-:18813991..18814973

Molecular Weight (calculated)

22701.4 Da

IEP (calculated)

6.367

GRAVY (calculated)

-0.213

Length

201 amino acids

Sequence
(BLAST)

001: MHGLWTYMFS KTEFHVLILG IDKAGKTTFL EKLKTIYSIS EGLPHDRIVP TVGLNIGRIE VANAKIVFWD LGGQPGLRSI WEKYYEEAHA LIYLIDAACP
101: SRFEDSKSAL EKALRHEDLQ GAPLLILANK QDLPNAVSAE ELDRYLDLKK LDERVYMFEA ASGYDGRGIK ESIEWLVGVM ERSKRTEALR ARSGYVPVPT
201: S

Best Arabidopsis Sequence Match ( AT5G52210.2 )
(BLAST)

001: MFSLMSGLWS YMFSKTEFNV LILGIDKAGK TTFLEKLKTI YSISEGLPHD RIVPTVGLNI GRIEVSNAKI VFWDLGGQPG LRSIWEKYYE EAHALIYLID
101: AACPTRFEDS KSALEKALRH EDLQGAPLLI LANKQDLTNA VSAEELDRYL DLKKLDERVY MFEAVSGYDG RGIKESIEWL VGVMEKSKRT ESLRARAGYT
201: PVPNS

Arabidopsis Description

ATARLB1At5g52210 [Source:UniProtKB/TrEMBL;Acc:Q38921]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.