Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0215g00070.t01 | Wine grape | endoplasmic reticulum | 82.38 | 77.56 |
| Bra029132.1-P | Field mustard | cytosol | 80.31 | 77.11 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 80.83 | 76.85 |
| Bra028298.1-P | Field mustard | cytosol | 79.27 | 76.12 |
| KRH11380 | Soybean | endoplasmic reticulum | 80.31 | 75.98 |
| GSMUA_Achr5P00190_001 | Banana | extracellular | 79.79 | 75.86 |
| CDY38908 | Canola | cytosol | 80.31 | 75.61 |
| PGSC0003DMT400043326 | Potato | cytosol | 92.23 | 75.11 |
| KRH20906 | Soybean | endoplasmic reticulum | 79.27 | 75.0 |
| CDY31913 | Canola | cytosol | 79.79 | 74.76 |
| AT5G52210.2 | Thale cress | cytosol | 79.27 | 74.63 |
| CDY00519 | Canola | cytosol | 79.27 | 74.27 |
| VIT_19s0027g00160.t01 | Wine grape | cytosol, extracellular | 48.19 | 70.99 |
| Os03t0392300-01 | Rice | cytosol | 72.54 | 68.97 |
| EER99714 | Sorghum | cytosol | 71.5 | 67.98 |
| Os07t0620400-01 | Rice | cytosol | 70.47 | 67.0 |
| Zm00001d029408_P001 | Maize | endoplasmic reticulum | 68.91 | 65.84 |
| EER94751 | Sorghum | cytosol | 68.91 | 65.84 |
| VIT_00s0189g00080.t01 | Wine grape | cytosol | 50.78 | 65.77 |
| TraesCS1A01G069400.1 | Wheat | peroxisome | 67.88 | 64.53 |
| TraesCS1D01G072000.1 | Wheat | peroxisome | 67.36 | 64.04 |
| TraesCS1B01G087700.1 | Wheat | peroxisome | 66.84 | 63.86 |
| HORVU1Hr1G014610.1 | Barley | cytosol | 66.32 | 63.05 |
| CDY32591 | Canola | cytosol | 80.31 | 61.26 |
| Zm00001d022172_P001 | Maize | golgi, peroxisome | 70.98 | 58.3 |
| TraesCS2D01G172000.1 | Wheat | peroxisome | 59.59 | 57.79 |
| TraesCS2B01G191100.2 | Wheat | cytosol, plastid | 60.1 | 54.21 |
| Solyc07g014650.2.1 | Tomato | cytosol | 31.61 | 36.09 |
| Solyc07g006640.2.1 | Tomato | plastid | 33.16 | 35.16 |
| Solyc03g005300.2.1 | Tomato | cytosol | 32.12 | 33.88 |
| Solyc05g005190.2.1 | Tomato | nucleus | 31.09 | 33.15 |
| Solyc01g100860.2.1 | Tomato | unclear | 30.57 | 32.6 |
| Solyc06g072800.2.1 | Tomato | cytosol | 22.28 | 32.58 |
| Solyc03g096910.2.1 | Tomato | cytosol | 22.28 | 32.58 |
| Solyc02g092970.2.1 | Tomato | cytosol | 30.05 | 30.37 |
| Solyc01g008000.2.1 | Tomato | plastid, unclear | 30.57 | 28.23 |
| Solyc01g100870.2.1 | Tomato | plastid | 28.5 | 26.19 |
| Solyc12g099080.1.1 | Tomato | unclear | 23.32 | 20.18 |
| Solyc04g025560.2.1 | Tomato | unclear | 24.35 | 18.58 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 |
| GO:GO:0008150 | GO:GO:0009987 | InterPro:IPR024156 | UniProt:K4D1Q5 | InterPro:P-loop_NTPase | PFAM:PF00025 |
| PRINTS:PR00328 | PFscan:PS51417 | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF218 | SMART:SM00175 | SMART:SM00177 |
| SMART:SM00178 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR | EnsemblPlantsGene:Solyc10g074630.1 |
| EnsemblPlants:Solyc10g074630.1.1 | TIGRFAMs:TIGR00231 | UniParc:UPI00027698CE | : | : | : |
Description
No Description!
Coordinates
chr10:+:58183787..58189509
Molecular Weight (calculated)
21553.9 Da
IEP (calculated)
5.376
GRAVY (calculated)
-0.182
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSKTEFHVL ILGIDKAGKT TLLEKIKSQY SNLEGLPPDR IVPTVGLNIG RVEASNTKLV FWDLGGQPGL RSIWEKYYEE AHAVIYVVDA ASPSRFEDSK
101: SALEKVLRHE DLQGAPLLIL ANKQDLADAV SAEEVARYLD LKKLDERAYT FLAVSSYDGL GIKESVNWLV DVMERSKRTE MLQLRAGANL ISN
101: SALEKVLRHE DLQGAPLLIL ANKQDLADAV SAEEVARYLD LKKLDERAYT FLAVSSYDGL GIKESVNWLV DVMERSKRTE MLQLRAGANL ISN
001: MFSLMSGLWS YMFSKTEFNV LILGIDKAGK TTFLEKLKTI YSISEGLPHD RIVPTVGLNI GRIEVSNAKI VFWDLGGQPG LRSIWEKYYE EAHALIYLID
101: AACPTRFEDS KSALEKALRH EDLQGAPLLI LANKQDLTNA VSAEELDRYL DLKKLDERVY MFEAVSGYDG RGIKESIEWL VGVMEKSKRT ESLRARAGYT
201: PVPNS
101: AACPTRFEDS KSALEKALRH EDLQGAPLLI LANKQDLTNA VSAEELDRYL DLKKLDERVY MFEAVSGYDG RGIKESIEWL VGVMEKSKRT ESLRARAGYT
201: PVPNS
Arabidopsis Description
ATARLB1At5g52210 [Source:UniProtKB/TrEMBL;Acc:Q38921]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.