Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g074630.1.1 | Tomato | cytosol | 75.11 | 92.23 |
| VIT_19s0027g00160.t01 | Wine grape | cytosol, extracellular | 40.08 | 72.52 |
| VIT_00s0215g00070.t01 | Wine grape | endoplasmic reticulum | 62.45 | 72.2 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 61.6 | 71.92 |
| KRH11380 | Soybean | endoplasmic reticulum | 61.18 | 71.08 |
| GSMUA_Achr5P00190_001 | Banana | extracellular | 60.34 | 70.44 |
| Bra029132.1-P | Field mustard | cytosol | 59.49 | 70.15 |
| KRH20906 | Soybean | endoplasmic reticulum | 60.34 | 70.1 |
| CDY38908 | Canola | cytosol | 60.34 | 69.76 |
| AT5G52210.2 | Thale cress | cytosol | 59.92 | 69.27 |
| Bra028298.1-P | Field mustard | cytosol | 58.65 | 69.15 |
| CDY31913 | Canola | cytosol | 59.92 | 68.93 |
| CDY00519 | Canola | cytosol | 59.49 | 68.45 |
| VIT_00s0189g00080.t01 | Wine grape | cytosol | 41.35 | 65.77 |
| Os03t0392300-01 | Rice | cytosol | 54.85 | 64.04 |
| Zm00001d029408_P001 | Maize | endoplasmic reticulum | 53.59 | 62.87 |
| EER99714 | Sorghum | cytosol | 53.59 | 62.56 |
| Os07t0620400-01 | Rice | cytosol | 53.59 | 62.56 |
| EER94751 | Sorghum | cytosol | 52.74 | 61.88 |
| TraesCS1A01G069400.1 | Wheat | peroxisome | 50.63 | 59.11 |
| TraesCS1D01G072000.1 | Wheat | peroxisome | 50.21 | 58.62 |
| TraesCS1B01G087700.1 | Wheat | peroxisome | 49.79 | 58.42 |
| HORVU1Hr1G014610.1 | Barley | cytosol | 49.79 | 58.13 |
| CDY32591 | Canola | cytosol | 60.34 | 56.52 |
| TraesCS2D01G172000.1 | Wheat | peroxisome | 45.15 | 53.77 |
| Zm00001d022172_P001 | Maize | golgi, peroxisome | 53.16 | 53.62 |
| TraesCS2B01G191100.2 | Wheat | cytosol, plastid | 47.68 | 52.8 |
| PGSC0003DMT400043258 | Potato | cytosol | 16.03 | 38.38 |
| PGSC0003DMT400034971 | Potato | cytosol | 24.05 | 31.15 |
| PGSC0003DMT400003226 | Potato | mitochondrion | 23.21 | 30.39 |
| PGSC0003DMT400042276 | Potato | mitochondrion | 23.21 | 30.39 |
| PGSC0003DMT400035158 | Potato | mitochondrion | 23.21 | 30.39 |
| PGSC0003DMT400064240 | Potato | cytosol | 21.52 | 30.0 |
| PGSC0003DMT400011952 | Potato | golgi | 22.78 | 30.0 |
| PGSC0003DMT400065739 | Potato | mitochondrion | 22.78 | 29.83 |
| PGSC0003DMT400069538 | Potato | cytosol | 23.63 | 29.02 |
| PGSC0003DMT400001454 | Potato | cytosol | 23.63 | 29.02 |
| PGSC0003DMT400075807 | Potato | cytosol | 21.94 | 28.73 |
| PGSC0003DMT400064241 | Potato | cytosol | 21.94 | 28.73 |
| PGSC0003DMT400070636 | Potato | cytosol, mitochondrion | 23.21 | 21.65 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 |
| GO:GO:0008150 | GO:GO:0009987 | InterPro:IPR024156 | UniProt:M1BEG0 | InterPro:P-loop_NTPase | PFAM:PF00025 |
| EnsemblPlantsGene:PGSC0003DMG400016822 | PGSC:PGSC0003DMG400016822 | EnsemblPlants:PGSC0003DMT400043326 | PRINTS:PR00328 | PFscan:PS51417 | PANTHER:PTHR11711 |
| PANTHER:PTHR11711:SF218 | SMART:SM00175 | SMART:SM00177 | SMART:SM00178 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR | TIGRFAMs:TIGR00231 | UniParc:UPI000294843C | : | : |
Description
ADP-ribosylation factor [Source:PGSC_GENE;Acc:PGSC0003DMG400016822]
Coordinates
chr10:+:48191387..48196239
Molecular Weight (calculated)
26164.4 Da
IEP (calculated)
5.148
GRAVY (calculated)
-0.173
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MPYLYMVPEP GPSVVCLPTY APVGPLGVKG GCSSGLKSHI CRGLDRWSAY MDLDNPPPHE LAFGTLLEKI KSQYSNLEGL PPDRIVPTVG LNIGRVEASN
101: TKLVFWDLGG QPGLRSIWEK YYEEAHAVIY VVDAASPSRF EDSKSALEKV LRHEDLQGAP LLILANKQDL ADAVSAEEVA RYLDLKKLDE RAYTFLAVSS
201: YDGLGIKESV NWLVDVMERS KRTEMLQLRA GANLISN
101: TKLVFWDLGG QPGLRSIWEK YYEEAHAVIY VVDAASPSRF EDSKSALEKV LRHEDLQGAP LLILANKQDL ADAVSAEEVA RYLDLKKLDE RAYTFLAVSS
201: YDGLGIKESV NWLVDVMERS KRTEMLQLRA GANLISN
001: MFSLMSGLWS YMFSKTEFNV LILGIDKAGK TTFLEKLKTI YSISEGLPHD RIVPTVGLNI GRIEVSNAKI VFWDLGGQPG LRSIWEKYYE EAHALIYLID
101: AACPTRFEDS KSALEKALRH EDLQGAPLLI LANKQDLTNA VSAEELDRYL DLKKLDERVY MFEAVSGYDG RGIKESIEWL VGVMEKSKRT ESLRARAGYT
201: PVPNS
101: AACPTRFEDS KSALEKALRH EDLQGAPLLI LANKQDLTNA VSAEELDRYL DLKKLDERVY MFEAVSGYDG RGIKESIEWL VGVMEKSKRT ESLRARAGYT
201: PVPNS
Arabidopsis Description
ATARLB1At5g52210 [Source:UniProtKB/TrEMBL;Acc:Q38921]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.