Factsheet for Zm00001d029408_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 2
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94751	Sorghum	cytosol	96.04	96.04
Os03t0392300-01	Rice	cytosol	84.16	83.74
GSMUA_Achr11P...	Banana	endoplasmic reticulum	77.23	76.85
GSMUA_Achr5P00190_001	Banana	extracellular	74.75	74.38
CDY31913	Canola	cytosol	70.3	68.93
Solyc10g074630.1.1	Tomato	cytosol	65.84	68.91
AT5G52210.2	Thale cress	cytosol	69.8	68.78
VIT_00s0215g00070.t01	Wine grape	endoplasmic reticulum	69.8	68.78
KRH11380	Soybean	endoplasmic reticulum	69.31	68.63
CDY00519	Canola	cytosol	69.8	68.45
Bra028298.1-P	Field mustard	cytosol	67.82	68.16
KRH20906	Soybean	endoplasmic reticulum	68.81	68.14
CDY38908	Canola	cytosol	68.32	67.32
Zm00001d022172_P001	Maize	golgi, peroxisome	78.22	67.23
Bra029132.1-P	Field mustard	cytosol	66.34	66.67
VIT_19s0027g00160.t01	Wine grape	cytosol, extracellular	40.59	62.6
VIT_00s0189g00080.t01	Wine grape	cytosol	44.06	59.73
CDY32591	Canola	cytosol	68.32	54.55
PGSC0003DMT400043326	Potato	cytosol	62.87	53.59
Zm00001d008295_P002	Maize	plastid	31.68	35.36
Zm00001d038533_P001	Maize	plastid	31.68	34.78
Zm00001d043113_P001	Maize	plastid	31.19	34.43
Zm00001d005231_P006	Maize	cytosol	31.68	34.41
Zm00001d019191_P007	Maize	peroxisome	32.18	32.66
Zm00001d052978_P001	Maize	extracellular	29.21	32.07
Zm00001d013007_P001	Maize	plastid	31.68	31.53
Zm00001d030157_P001	Maize	extracellular	29.7	30.93
Zm00001d015121_P002	Maize	mitochondrion	29.21	30.41
Zm00001d051546_P001	Maize	cytosol	28.71	29.9
Zm00001d017650_P002	Maize	cytosol	25.74	29.21
Zm00001d023657_P001	Maize	cytosol	6.44	27.66
Zm00001d044868_P001	Maize	cytosol	25.74	27.51
Zm00001d017717_P001	Maize	cytosol	29.7	27.15
Zm00001d033414_P001	Maize	extracellular	31.19	24.8
Zm00001d012537_P003	Maize	cytosol	23.76	23.65

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:B4FF78	EMBL:BT035766	EMBL:EU968782	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	InterPro:IPR024156
ProteinID:ONL98663.1	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF218	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI00017B6555	EnsemblPlantsGene:Zm00001d029408	EnsemblPlants:Zm00001d029408_P001
EnsemblPlants:Zm00001d029408_T001	:	:	:	:	:

Description

GTP-binding protein 1

Coordinates

chr1:+:69295860..69299198

Molecular Weight (calculated)

22775.5 Da

IEP (calculated)

6.536

GRAVY (calculated)

-0.189

Length

202 amino acids

Sequence
(BLAST)

001: MFSLFYGLWK YVFAKDEFRV LILGVDRAGK TTLLEKLKSI YLKGEGLPPD RVVPTVGLNI GRIEDAKAKL VFWDLGGQVS LRTIWEKYYE EAHAIMYVID
101: AATASSFEDS KSALEKVIRH EHLRGAPLLI VANKQDLPGA IDEEELAKFL HKELDERPYT FQAVSAYDGR GIKSGIDWLV EQMEKSKRTE TLQARAGVAG
201: QI

Best Arabidopsis Sequence Match ( AT5G52210.2 )
(BLAST)

001: MFSLMSGLWS YMFSKTEFNV LILGIDKAGK TTFLEKLKTI YSISEGLPHD RIVPTVGLNI GRIEVSNAKI VFWDLGGQPG LRSIWEKYYE EAHALIYLID
101: AACPTRFEDS KSALEKALRH EDLQGAPLLI LANKQDLTNA VSAEELDRYL DLKKLDERVY MFEAVSGYDG RGIKESIEWL VGVMEKSKRT ESLRARAGYT
201: PVPNS

Arabidopsis Description

ATARLB1At5g52210 [Source:UniProtKB/TrEMBL;Acc:Q38921]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.