Factsheet for Zm00001d033414_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37868	Sorghum	cytosol	70.87	97.3
TraesCS1B01G453100.1	Wheat	cytosol	43.7	94.07
Os02t0327100-01	Rice	cytosol	68.11	93.51
TraesCS5B01G013100.1	Wheat	cytosol	67.32	92.43
Solyc07g014650.2.1	Tomato	cytosol	61.02	91.72
AT2G18390.1	Thale cress	cytosol	65.35	89.73
VIT_04s0023g01820.t01	Wine grape	cytosol	65.35	89.73
KRH28677	Soybean	cytosol	65.35	89.73
KRH76824	Soybean	cytosol	65.35	89.73
Bra039613.1-P	Field mustard	cytosol	64.57	88.65
CDY29231	Canola	cytosol	64.57	88.65
GSMUA_Achr9P26270_001	Banana	cytosol	64.57	88.65
CDY36479	Canola	cytosol	64.17	88.11
PGSC0003DMT400043258	Potato	cytosol	34.25	87.88
Bra024470.1-P	Field mustard	cytosol	63.39	87.03
HORVU5Hr1G004340.2	Barley	cytosol, plastid	69.69	74.37
HORVU5Hr1G002120.6	Barley	cytosol, plastid	70.47	70.47
TraesCS4A01G292900.1	Wheat	cytosol	34.25	69.6
CDY13039	Canola	cytosol	64.57	66.94
TraesCS4D01G018600.1	Wheat	cytosol	38.19	66.44
Zm00001d043113_P001	Maize	plastid	35.43	49.18
Zm00001d008295_P002	Maize	plastid	35.04	49.17
Zm00001d005231_P006	Maize	cytosol	35.83	48.92
Zm00001d038533_P001	Maize	plastid	35.04	48.37
Zm00001d023657_P001	Maize	cytosol	8.66	46.81
Zm00001d019191_P007	Maize	peroxisome	35.83	45.73
Zm00001d013007_P001	Maize	plastid	35.43	44.34
Zm00001d030157_P001	Maize	extracellular	29.92	39.18
Zm00001d051546_P001	Maize	cytosol	28.74	37.63
Zm00001d015121_P002	Maize	mitochondrion	27.95	36.6
Zm00001d012537_P003	Maize	cytosol	28.74	35.96
Zm00001d017650_P002	Maize	cytosol	25.2	35.96
Zm00001d044868_P001	Maize	cytosol	26.38	35.45
Zm00001d052978_P001	Maize	extracellular	25.59	35.33
Zm00001d017717_P001	Maize	cytosol	29.13	33.48
Zm00001d029408_P001	Maize	endoplasmic reticulum	24.8	31.19
Zm00001d022172_P001	Maize	golgi, peroxisome	24.02	25.96

Protein Annotations

MapMan:20.3.3.2	MapMan:22.3.2.1	Gene3D:3.40.50.300	UniProt:A0A1D6KYW2	GO:GO:0000003	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0007275	GO:GO:0008150	GO:GO:0009558
GO:GO:0009653	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009960	GO:GO:0009987
InterPro:IPR024156	ProteinID:ONM07572.1	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417
PANTHER:PTHR11711	PANTHER:PTHR11711:SF26	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI000844EA86	EnsemblPlantsGene:Zm00001d033414	EnsemblPlants:Zm00001d033414_P001
EnsemblPlants:Zm00001d033414_T001	SEG:seg	:	:	:	:

Description

ADP-ribosylation factor-like protein 2

Coordinates

chr1:+:262412278..262419216

Molecular Weight (calculated)

29120.6 Da

IEP (calculated)

8.598

GRAVY (calculated)

-0.064

Length

254 amino acids

Sequence
(BLAST)

001: MWSSDEAVRV RSRFLCLIHV VQRIVLRRIE LCGEVELLSI LQYVKRFGES PLPSHAPPLI MGLLSIIRKI KRKEKEMRIL MVGLDNSGKT TIVLKINGED
101: TSIISPTLGF NIKTIKYHKY SLNIWDVGGQ KTIRSYWRNY FEQTDGLVWV VDSSDIRRLD DCRAELHNLL KEERLVGASL LVFANKQDIQ GALKPDEIAK
201: ADSPSIFFQV LNLEVMDRSR HWKIVGCSAY TGEGLLEGFD WLVQDVASRI YVLD

Best Arabidopsis Sequence Match ( AT2G18390.1 )
(BLAST)

001: MGLLSIIRKI KKKEKEMRIL MVGLDNSGKT TIVLKINGED TSVISPTLGF NIKTIIYQKY TLNIWDVGGQ KTIRSYWRNY FEQTDGLVWV VDSSDLRRLD
101: DCKMELDNLL KEERLAGSSL LILANKQDIQ GALTPDEIGK VLNLESMDKS RHWKIVGCSA YTGEGLLEGF DWLVQDIASR IYMLD

Arabidopsis Description

ARL2TTN5 [Source:UniProtKB/TrEMBL;Acc:A0A178VQD7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.