CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G453100.1	Wheat	cytosol	61.08	95.76
Os02t0327100-01	Rice	cytosol	94.05	94.05
TraesCS5B01G013100.1	Wheat	cytosol	93.51	93.51
Solyc07g014650.2.1	Tomato	cytosol	83.24	91.12
VIT_04s0023g01820.t01	Wine grape	cytosol	90.27	90.27
AT2G18390.1	Thale cress	cytosol	89.73	89.73
KRH76824	Soybean	cytosol	89.73	89.73
KRH28677	Soybean	cytosol	89.73	89.73
Bra039613.1-P	Field mustard	cytosol	89.19	89.19
CDY29231	Canola	cytosol	89.19	89.19
GSMUA_Achr9P26270_001	Banana	cytosol	89.19	89.19
CDY36479	Canola	cytosol	88.65	88.65
Bra024470.1-P	Field mustard	cytosol	87.57	87.57
PGSC0003DMT400043258	Potato	cytosol	45.95	85.86
HORVU5Hr1G004340.2	Barley	cytosol, plastid	94.59	73.53
Zm00001d033414_P001	Maize	extracellular	97.3	70.87
TraesCS4A01G292900.1	Wheat	cytosol	47.57	70.4
HORVU5Hr1G002120.6	Barley	cytosol, plastid	94.05	68.5
CDY13039	Canola	cytosol	89.19	67.35
TraesCS4D01G018600.1	Wheat	cytosol	52.43	66.44
EER96075	Sorghum	mitochondrion	49.19	50.28
EER93218	Sorghum	mitochondrion	49.19	50.28
EES19719	Sorghum	mitochondrion	48.11	49.17
EES14799	Sorghum	cytosol, mitochondrion	43.24	43.96
EER94416	Sorghum	cytosol	41.08	39.18
EES07411	Sorghum	cytosol	40.0	38.14
OQU85607	Sorghum	cytosol, mitochondrion	36.22	37.43
EES06219	Sorghum	mitochondrion	38.38	36.6
EER89435	Sorghum	cytosol	37.3	36.51
EES08754	Sorghum	cytosol, mitochondrion	36.22	36.41
OQU87737	Sorghum	cytosol	48.65	33.96
EER94751	Sorghum	cytosol	33.51	30.69
EER99714	Sorghum	cytosol	32.97	30.05
OQU86657	Sorghum	peroxisome, plastid	49.19	29.64

Protein Annotations

MapMan:20.3.3.2	MapMan:22.3.2.1	Gene3D:3.40.50.300	EntrezGene:8054191	UniProt:A0A1B6QIW8	GO:GO:0000003
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0007275	GO:GO:0008150
GO:GO:0009558	GO:GO:0009653	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009960
GO:GO:0009987	InterPro:IPR024156	EnsemblPlants:KXG37868	ProteinID:KXG37868	ProteinID:KXG37868.1	InterPro:P-loop_NTPase
PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF26	SMART:SM00177
SMART:SM00178	EnsemblPlantsGene:SORBI_3001G141200	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR
TIGRFAMs:TIGR00231	UniParc:UPI0003C6802D	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:11334815..11339337

Molecular Weight (calculated)

21031.6 Da

IEP (calculated)

9.034

GRAVY (calculated)

-0.161

Length

185 amino acids

Sequence
(BLAST)

001: MGLLSIIRKI KRKEKEMRIL MVGLDNSGKT TIVLKINGED TSVISPTLGF NIKTIKYHKY SLNIWDVGGQ KTIRSYWRNY FEQTDGLVWV VDSSDIRRLD
101: DCRAELHNLL KEERLAGASL LVFANKQDIQ GALKPAEIAK VLNLEVMNSS RHWKIVGCSA YTGEGLLEGF DWLVQDVASR IYVLD

Best Arabidopsis Sequence Match ( AT2G18390.1 )
(BLAST)

001: MGLLSIIRKI KKKEKEMRIL MVGLDNSGKT TIVLKINGED TSVISPTLGF NIKTIIYQKY TLNIWDVGGQ KTIRSYWRNY FEQTDGLVWV VDSSDLRRLD
101: DCKMELDNLL KEERLAGSSL LILANKQDIQ GALTPDEIGK VLNLESMDKS RHWKIVGCSA YTGEGLLEGF DWLVQDIASR IYMLD

Arabidopsis Description

ARL2TTN5 [Source:UniProtKB/TrEMBL;Acc:A0A178VQD7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.