Factsheet for GSMUA_Achr9P26270_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G453100.1	Wheat	cytosol	58.92	92.37
KRH76824	Soybean	cytosol	90.27	90.27
KRH28677	Soybean	cytosol	90.27	90.27
Solyc07g014650.2.1	Tomato	cytosol	81.62	89.35
TraesCS5A01G014900.1	Wheat	cytosol	89.19	89.19
KXG37868	Sorghum	cytosol	89.19	89.19
TraesCS5B01G013100.1	Wheat	cytosol	89.19	89.19
TraesCS5D01G020800.1	Wheat	cytosol	89.19	89.19
AT2G18390.1	Thale cress	cytosol	89.19	89.19
CDY29231	Canola	cytosol	89.19	89.19
Bra039613.1-P	Field mustard	cytosol	89.19	89.19
VIT_04s0023g01820.t01	Wine grape	cytosol	88.65	88.65
CDY36479	Canola	cytosol	88.65	88.65
Os02t0327100-01	Rice	cytosol	88.65	88.65
TraesCS1D01G429700.1	Wheat	cytosol	88.11	88.11
Bra024470.1-P	Field mustard	cytosol	87.57	87.57
PGSC0003DMT400043258	Potato	cytosol	44.86	83.84
TraesCS1A01G421700.1	Wheat	cytosol	88.11	82.74
HORVU5Hr1G004340.2	Barley	cytosol, plastid	89.19	69.33
TraesCS4A01G292900.1	Wheat	cytosol	46.49	68.8
CDY13039	Canola	cytosol	89.19	67.35
TraesCS4D01G018600.1	Wheat	cytosol	52.43	66.44
Zm00001d033414_P001	Maize	extracellular	88.65	64.57
HORVU5Hr1G002120.6	Barley	cytosol, plastid	88.65	64.57
GSMUA_Achr6P32180_001	Banana	cytosol	36.22	49.26
GSMUA_Achr5P07760_001	Banana	mitochondrion	46.49	47.51
GSMUA_Achr2P11590_001	Banana	mitochondrion	46.49	47.51
GSMUA_Achr9P17120_001	Banana	cytosol	41.08	47.5
GSMUA_Achr9P05130_001	Banana	mitochondrion	45.95	46.96
GSMUA_Achr10P...	Banana	cytosol	40.54	46.88
GSMUA_Achr3P09430_001	Banana	cytosol	40.54	46.88
GSMUA_Achr4P10250_001	Banana	mitochondrion	45.41	46.41
GSMUA_Achr4P02310_001	Banana	mitochondrion	44.86	45.86
GSMUA_Achr7P18350_001	Banana	cytosol	41.08	45.78
GSMUA_Achr10P...	Banana	cytosol	41.08	45.78
GSMUA_Achr11P...	Banana	cytosol	47.03	43.5
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	41.62	42.31
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	41.62	42.31
GSMUA_AchrUn_...	Banana	cytosol	37.84	37.63
GSMUA_Achr4P27450_001	Banana	cytosol	38.92	37.11
GSMUA_Achr5P03700_001	Banana	cytosol	38.38	36.6
GSMUA_Achr7P04780_001	Banana	cytosol	36.76	36.17
GSMUA_Achr4P01270_001	Banana	endoplasmic reticulum	35.68	36.07
GSMUA_Achr1P04710_001	Banana	endoplasmic reticulum, extracellular	35.68	36.07
GSMUA_Achr3P18390_001	Banana	plasma membrane	47.03	35.95
GSMUA_Achr11P...	Banana	endoplasmic reticulum	33.51	30.54
GSMUA_Achr5P00190_001	Banana	extracellular	33.51	30.54
GSMUA_Achr6P08570_001	Banana	cytosol	47.03	27.1

Protein Annotations

MapMan:20.3.3.2	MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154
GO:GO:0007165	GO:GO:0007264	GO:GO:0007275	GO:GO:0008150	GO:GO:0009558	GO:GO:0009653
GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009960	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr9G26270_001
EnsemblPlants:GSMUA_Achr9P26270_001	EnsemblPlants:GSMUA_Achr9T26270_001	InterPro:IPR024156	UniProt:M0U3N4	InterPro:P-loop_NTPase	PFAM:PF00025
PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF26	SMART:SM00177	SMART:SM00178
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI00029696C1
SEG:seg	:	:	:	:	:

Description

Probable ADP-ribosylation factor At2g18390 [Source:GMGC_GENE;Acc:GSMUA_Achr9G26270_001]

Coordinates

chr9:+:30729592..30733705

Molecular Weight (calculated)

21123.7 Da

IEP (calculated)

9.026

GRAVY (calculated)

-0.231

Length

185 amino acids

Sequence
(BLAST)

001: MGLLSIIRKI KKKEKEMRIL MVGLDNSGKT TIVLKVNGED TSVISPTLGF NIKTIKYQKY SLNIWDVGGQ KTIRSYWRNY FEQTDGLVWV VDSSDVRRMD
101: DCRSELENLL KEERLSGASL LIFANKQDIQ GALKPADIVK VLNLDAMDKT RHWQIVGCSA YTGEGLLRGF DWLVQDIASR IYMLD

Best Arabidopsis Sequence Match ( AT2G18390.1 )
(BLAST)

001: MGLLSIIRKI KKKEKEMRIL MVGLDNSGKT TIVLKINGED TSVISPTLGF NIKTIIYQKY TLNIWDVGGQ KTIRSYWRNY FEQTDGLVWV VDSSDLRRLD
101: DCKMELDNLL KEERLAGSSL LILANKQDIQ GALTPDEIGK VLNLESMDKS RHWKIVGCSA YTGEGLLEGF DWLVQDIASR IYMLD

Arabidopsis Description

ARL2TTN5 [Source:UniProtKB/TrEMBL;Acc:A0A178VQD7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.