Factsheet for GSMUA_Achr7P18350_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
nucleus 1
mitochondrion 2
cytosol 3
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P17120_001	Banana	cytosol	95.18	98.75
GSMUA_Achr3P09430_001	Banana	cytosol	93.98	97.5
GSMUA_Achr10P...	Banana	cytosol	93.37	96.88
GSMUA_Achr6P32180_001	Banana	cytosol	78.92	96.32
GSMUA_Achr10P...	Banana	cytosol	95.78	95.78
TraesCS2A01G235500.1	Wheat	golgi, plastid	95.78	87.85
GSMUA_Achr2P11590_001	Banana	mitochondrion	95.78	87.85
AT1G10630.2	Thale cress	mitochondrion	95.18	87.29
EER96075	Sorghum	mitochondrion	95.18	87.29
KRG93262	Soybean	nucleus	95.18	87.29
KRH56584	Soybean	mitochondrion	95.18	87.29
Os07t0223100-01	Rice	plasma membrane	95.18	87.29
Os07t0223400-01	Rice	mitochondrion	95.18	87.29
AT2G47170.2	Thale cress	mitochondrion	95.18	87.29
TraesCS2D01G244900.1	Wheat	mitochondrion, peroxisome	95.18	87.29
PGSC0003DMT400003226	Potato	mitochondrion	94.58	86.74
AT1G23490.1	Thale cress	mitochondrion, peroxisome	94.58	86.74
CDY54291	Canola	mitochondrion, peroxisome	94.58	86.74
CDY44152	Canola	mitochondrion, peroxisome	94.58	86.74
CDY41444	Canola	mitochondrion	94.58	86.74
AT1G70490.4	Thale cress	mitochondrion, peroxisome	94.58	86.74
CDY25787	Canola	mitochondrion, peroxisome	94.58	86.74
Bra016344.1-P	Field mustard	mitochondrion	94.58	86.74
CDX91717	Canola	mitochondrion	94.58	86.74
CDY03747	Canola	mitochondrion, peroxisome	94.58	86.74
CDY11588	Canola	mitochondrion, peroxisome	94.58	86.74
CDY09441	Canola	mitochondrion, peroxisome	94.58	86.74
CDY04706	Canola	mitochondrion, peroxisome	94.58	86.74
CDY47137	Canola	peroxisome	94.58	86.74
GSMUA_Achr5P07760_001	Banana	mitochondrion	93.98	86.19
Bra024604.1-P	Field mustard	mitochondrion	93.98	86.19
GSMUA_Achr9P05130_001	Banana	mitochondrion	93.98	86.19
GSMUA_Achr4P10250_001	Banana	mitochondrion	93.37	85.64
VIT_14s0066g01080.t01	Wine grape	mitochondrion	93.37	85.64
GSMUA_Achr4P02310_001	Banana	mitochondrion	91.57	83.98
Bra012376.1-P	Field mustard	cytosol	94.58	83.51
KRH36902	Soybean	endoplasmic reticulum	91.57	82.61
CDX68343	Canola	cytosol	89.16	81.32
Bra003954.1-P	Field mustard	cytosol	88.55	81.22
Zm00001d019191_P007	Maize	peroxisome	95.18	79.4
GSMUA_Achr11P...	Banana	cytosol	95.18	79.0
TraesCS5B01G479100.1	Wheat	golgi	94.58	74.41
CDY23500	Canola	cytosol	88.55	68.69
HORVU5Hr1G111500.2	Barley	mitochondrion	95.18	67.52
GSMUA_Achr3P18390_001	Banana	plasma membrane	95.18	65.29
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	59.64	54.4
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	59.64	54.4
GSMUA_Achr7P04780_001	Banana	cytosol	58.43	51.6
GSMUA_AchrUn_...	Banana	cytosol	57.23	51.08
GSMUA_Achr5P03700_001	Banana	cytosol	59.64	51.03
GSMUA_Achr4P27450_001	Banana	cytosol	58.43	50.0
GSMUA_Achr6P08570_001	Banana	cytosol	96.39	49.84
GSMUA_Achr1P04710_001	Banana	endoplasmic reticulum, extracellular	54.82	49.73
GSMUA_Achr4P01270_001	Banana	endoplasmic reticulum	53.61	48.63
GSMUA_Achr9P26270_001	Banana	cytosol	45.78	41.08
GSMUA_Achr5P00190_001	Banana	extracellular	33.73	27.59
GSMUA_Achr11P...	Banana	endoplasmic reticulum	32.53	26.6

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264
GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr7G18350_001	EnsemblPlants:GSMUA_Achr7P18350_001	EnsemblPlants:GSMUA_Achr7T18350_001	InterPro:IPR024156
UniProt:M0TIM2	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF215	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF
InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI0002960272	:	:	:

Description

ADP-ribosylation factor 1 [Source:GMGC_GENE;Acc:GSMUA_Achr7G18350_001]

Coordinates

chr7:-:21170186..21174212

Molecular Weight (calculated)

18892.5 Da

IEP (calculated)

6.010

GRAVY (calculated)

-0.308

Length

166 amino acids

Sequence
(BLAST)

001: MVGLDAAGKT TILYKLKLGE IVTTIPTIGF NVETVEYKNI SFTVWDVGGQ DKIRPLWRHY FQNTQGLIFV VDSNDRDRVV EARDELHRML NEDELRDAVL
101: LVFANKQDLP NAMNAAEITD KLGLHSLRQR HWYIQSTCAT SGEGLYEGLD WLSSNIASKK KSLLHE

Best Arabidopsis Sequence Match ( AT1G10630.1 )
(BLAST)

001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A

Arabidopsis Description

ATARFA1FADP-ribosylation factor A1F [Source:UniProtKB/TrEMBL;Acc:Q6ID97]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.