Factsheet for GSMUA_Achr5P03700_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
endoplasmic reticulum 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P27450_001	Banana	cytosol	93.81	93.81
Os10t0580200-01	Rice	plasma membrane	89.69	90.62
EER94416	Sorghum	cytosol	89.69	89.69
Zm00001d030157_P001	Maize	extracellular	89.69	89.69
HORVU1Hr1G051350.1	Barley	cytosol	87.11	88.48
TraesCS1A01G197800.1	Wheat	golgi	87.11	88.48
TraesCS1D01G201300.1	Wheat	cytosol	87.11	88.48
TraesCS1B01G212500.1	Wheat	cytosol	87.11	88.48
GSMUA_AchrUn_...	Banana	cytosol	83.51	87.1
GSMUA_Achr7P04780_001	Banana	cytosol	83.51	86.17
GSMUA_Achr6P32180_001	Banana	cytosol	43.3	61.76
GSMUA_Achr10P...	Banana	cytosol	50.52	61.25
GSMUA_Achr9P05130_001	Banana	mitochondrion	56.7	60.77
GSMUA_Achr3P09430_001	Banana	cytosol	50.0	60.62
GSMUA_Achr9P17120_001	Banana	cytosol	50.0	60.62
GSMUA_Achr2P11590_001	Banana	mitochondrion	56.19	60.22
GSMUA_Achr4P10250_001	Banana	mitochondrion	55.67	59.67
GSMUA_Achr5P07760_001	Banana	mitochondrion	55.67	59.67
GSMUA_Achr10P...	Banana	cytosol	51.03	59.64
GSMUA_Achr7P18350_001	Banana	cytosol	51.03	59.64
GSMUA_Achr4P02310_001	Banana	mitochondrion	55.15	59.12
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	53.09	56.59
GSMUA_Achr11P...	Banana	cytosol	56.7	55.0
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	51.55	54.95
GSMUA_Achr4P01270_001	Banana	endoplasmic reticulum	45.36	48.09
GSMUA_Achr1P04710_001	Banana	endoplasmic reticulum, extracellular	44.33	46.99
GSMUA_Achr3P18390_001	Banana	plasma membrane	57.22	45.87
GSMUA_Achr9P26270_001	Banana	cytosol	36.6	38.38
GSMUA_Achr6P08570_001	Banana	cytosol	56.19	33.96
GSMUA_Achr5P00190_001	Banana	extracellular	31.44	30.05
GSMUA_Achr11P...	Banana	endoplasmic reticulum	29.9	28.57

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264
GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr5G03700_001	EnsemblPlants:GSMUA_Achr5P03700_001	EnsemblPlants:GSMUA_Achr5T03700_001	InterPro:IPR024156
UniProt:M0SVE9	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF300	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF
InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI000295C62F	:	:	:

Description

ADP-ribosylation factor [Source:GMGC_GENE;Acc:GSMUA_Achr5G03700_001]

Coordinates

chr5:+:2586034..2593085

Molecular Weight (calculated)

21772.4 Da

IEP (calculated)

8.203

GRAVY (calculated)

-0.088

Length

194 amino acids

Sequence
(BLAST)

001: MGQAFRKLFD SIFGNKEMRV VMLGLDAAGK TTILYKLHIG EVLSTVPTIG FNVEKVQYKN VMFTVWDVGG QEKLRPLWRH YFNNTDGLIY VVDSLDRERI
101: GKAKAEFQAI INDPFMLNSV ILVFANKQDM RGAMTPMEVC EGLGLYDLRN RVWHIQGTCA LRGDGLYEGL DWLASTLKEL QPSGRATSVG TSSS

Best Arabidopsis Sequence Match ( AT5G17060.2 )
(BLAST)

001: MGQAFRKLFD TFFGNQEMRV VMLGLDAAGK TTILYKLHIG EVLSTVPTIG FNVEKVQYKN VMFTVWDVGG QEKLRPLWRH YFNNTDGLIY VVDSLDRERI
101: GKAKQEFQEI IKDPFMLNSI ILVFANKQDM RGAMSPREVC EGLGLFDLKN RKWHIQGTCA LRGDGLYEGL DWLSSTLKDV KAAGFTSVGH SF

Arabidopsis Description

ATARFB1BADP-ribosylation factor B1B [Source:UniProtKB/TrEMBL;Acc:Q9LFJ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.