Factsheet for GSMUA_Achr6P08570_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
endoplasmic reticulum 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P32180_001	Banana	cytosol	42.06	99.26
AT1G10630.2	Thale cress	mitochondrion	55.76	98.89
GSMUA_Achr9P17120_001	Banana	cytosol	49.22	98.75
KRG93262	Soybean	nucleus	55.45	98.34
GSMUA_Achr2P11590_001	Banana	mitochondrion	55.45	98.34
KRH56584	Soybean	mitochondrion	55.45	98.34
EER93218	Sorghum	mitochondrion	55.45	98.34
CDY54291	Canola	mitochondrion, peroxisome	55.45	98.34
CDY44152	Canola	mitochondrion, peroxisome	55.45	98.34
CDY25787	Canola	mitochondrion, peroxisome	55.45	98.34
CDY11588	Canola	mitochondrion, peroxisome	55.45	98.34
CDY09441	Canola	mitochondrion, peroxisome	55.45	98.34
CDY03747	Canola	mitochondrion, peroxisome	55.45	98.34
AT1G23490.1	Thale cress	mitochondrion, peroxisome	55.45	98.34
AT1G70490.4	Thale cress	mitochondrion, peroxisome	55.45	98.34
AT2G47170.2	Thale cress	mitochondrion	55.45	98.34
CDY04706	Canola	mitochondrion, peroxisome	55.45	98.34
CDY41444	Canola	mitochondrion	55.14	97.79
CDY47137	Canola	peroxisome	55.14	97.79
Bra024604.1-P	Field mustard	mitochondrion	55.14	97.79
Bra016344.1-P	Field mustard	mitochondrion	55.14	97.79
CDX91717	Canola	mitochondrion	55.14	97.79
PGSC0003DMT400003226	Potato	mitochondrion	55.14	97.79
GSMUA_Achr3P09430_001	Banana	cytosol	48.6	97.5
GSMUA_Achr5P07760_001	Banana	mitochondrion	54.83	97.24
GSMUA_Achr10P...	Banana	cytosol	48.29	96.88
GSMUA_Achr9P05130_001	Banana	mitochondrion	54.52	96.69
GSMUA_Achr7P18350_001	Banana	cytosol	49.84	96.39
GSMUA_Achr10P...	Banana	cytosol	49.84	96.39
VIT_14s0066g01080.t01	Wine grape	mitochondrion	54.21	96.13
GSMUA_Achr4P10250_001	Banana	mitochondrion	53.58	95.03
Bra012376.1-P	Field mustard	cytosol	55.45	94.68
GSMUA_Achr4P02310_001	Banana	mitochondrion	52.96	93.92
KRH36902	Soybean	endoplasmic reticulum	52.96	92.39
CDX68343	Canola	cytosol	51.4	90.66
Bra003954.1-P	Field mustard	cytosol	51.09	90.61
GSMUA_Achr11P...	Banana	cytosol	55.76	89.5
TraesCS5D01G480200.1	Wheat	unclear	57.01	86.73
TraesCS5B01G479100.1	Wheat	golgi	56.7	86.26
TraesCS5A01G467400.1	Wheat	cytosol	56.7	86.26
CDY23500	Canola	cytosol	51.09	76.64
HORVU5Hr1G111500.2	Barley	mitochondrion	55.76	76.5
GSMUA_Achr3P18390_001	Banana	plasma membrane	57.63	76.45
Zm00001d012537_P003	Maize	cytosol	44.86	70.94
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	34.58	60.99
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	34.27	60.44
GSMUA_Achr7P04780_001	Banana	cytosol	33.33	56.91
GSMUA_AchrUn_...	Banana	cytosol	32.71	56.45
GSMUA_Achr5P03700_001	Banana	cytosol	33.96	56.19
GSMUA_Achr4P27450_001	Banana	cytosol	33.33	55.15
GSMUA_Achr1P04710_001	Banana	endoplasmic reticulum, extracellular	30.22	53.01
GSMUA_Achr4P01270_001	Banana	endoplasmic reticulum	29.91	52.46
GSMUA_Achr9P26270_001	Banana	cytosol	27.1	47.03
GSMUA_Achr5P00190_001	Banana	extracellular	19.94	31.53
GSMUA_Achr11P...	Banana	endoplasmic reticulum	19.0	30.05

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264
GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr6G08570_001	EnsemblPlants:GSMUA_Achr6P08570_001	EnsemblPlants:GSMUA_Achr6T08570_001	InterPro:IPR024156
UniProt:M0T5A6	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF215	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI000295A181	SEG:seg	:

Description

ADP-ribosylation factor 1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G08570_001]

Coordinates

chr6:+:5702462..5707889

Molecular Weight (calculated)

36517.8 Da

IEP (calculated)

8.814

GRAVY (calculated)

-0.201

Length

321 amino acids

Sequence
(BLAST)

001: MDWSVKTFIE RQRKQGRVLR IGKIGGRKKA VLKNLFSCYL YYSAVVKNHH NGGAVISNSY EPDLYRTPYD SHVTSVAFFL FIPLHLHFPF PSPCGFEGRE
101: EAEASLAPSL SISPPLSRSP AEGKMGLSFA KLFSRLFAKK EMRILMVGLD AAGKTTILYK LKLGEIVTTI PTIGFNVETV EYKNISFTVW DVGGQDKIRP
201: LWRHYFQNTQ GLIFVVDSND RDRVVEARDE LHRMLNEDEL RDAVLLVFAN KQDLPNAMNA AEITDKLGLH SLRQRHWYIQ STCATSGEGL YEGLDWLSSN
301: IASKSWHHFF LFIFNGGESW C

Best Arabidopsis Sequence Match ( AT1G10630.1 )
(BLAST)

001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A

Arabidopsis Description

ATARFA1FADP-ribosylation factor A1F [Source:UniProtKB/TrEMBL;Acc:Q6ID97]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.