Factsheet for TraesCS5A01G467400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93218	Sorghum	mitochondrion	85.31	99.45
TraesCS5D01G480200.1	Wheat	unclear	99.05	99.05
TraesCS5B01G479100.1	Wheat	golgi	98.1	98.1
TraesCS2A01G235500.1	Wheat	golgi, plastid	83.89	97.79
KRH56584	Soybean	mitochondrion	83.89	97.79
KRG93262	Soybean	nucleus	83.89	97.79
AT2G47170.2	Thale cress	mitochondrion	83.41	97.24
AT1G10630.2	Thale cress	mitochondrion	83.41	97.24
PGSC0003DMT400003226	Potato	mitochondrion	83.41	97.24
TraesCS3A01G337300.1	Wheat	mitochondrion	83.41	96.7
AT1G23490.1	Thale cress	mitochondrion, peroxisome	82.94	96.69
CDY54291	Canola	mitochondrion, peroxisome	82.94	96.69
CDY44152	Canola	mitochondrion, peroxisome	82.94	96.69
CDY41444	Canola	mitochondrion	82.94	96.69
CDY25787	Canola	mitochondrion, peroxisome	82.94	96.69
CDY11588	Canola	mitochondrion, peroxisome	82.94	96.69
CDY09441	Canola	mitochondrion, peroxisome	82.94	96.69
CDY04706	Canola	mitochondrion, peroxisome	82.94	96.69
CDY03747	Canola	mitochondrion, peroxisome	82.94	96.69
CDX91717	Canola	mitochondrion	82.94	96.69
VIT_14s0066g01080.t01	Wine grape	mitochondrion	82.94	96.69
Bra016344.1-P	Field mustard	mitochondrion	82.94	96.69
AT1G70490.4	Thale cress	mitochondrion, peroxisome	82.94	96.69
CDY47137	Canola	peroxisome	82.46	96.13
Bra024604.1-P	Field mustard	mitochondrion	82.46	96.13
TraesCS1A01G306200.1	Wheat	mitochondrion	83.41	94.62
TraesCS5A01G142100.1	Wheat	cytosol	80.09	93.37
Bra012376.1-P	Field mustard	cytosol	82.94	93.09
KRH36902	Soybean	endoplasmic reticulum	79.62	91.3
Zm00001d013007_P001	Maize	plastid	87.2	90.64
CDX68343	Canola	cytosol	77.25	89.56
Bra003954.1-P	Field mustard	cytosol	76.78	89.5
HORVU5Hr1G111500.2	Barley	mitochondrion	84.83	76.5
CDY23500	Canola	cytosol	76.78	75.7
TraesCS1A01G197800.1	Wheat	golgi	51.66	57.07
GSMUA_Achr6P08570_001	Banana	cytosol	86.26	56.7
TraesCS7A01G284000.3	Wheat	cytosol, mitochondrion	52.61	56.06
TraesCS6A01G268000.1	Wheat	cytosol	50.71	56.02
TraesCS4A01G149200.1	Wheat	cytosol	45.02	51.63
TraesCS5A01G014900.1	Wheat	cytosol	41.71	47.57
TraesCS6A01G086900.2	Wheat	cytosol	43.13	45.05
TraesCS1A01G421700.1	Wheat	cytosol	41.23	44.16
TraesCS4A01G292900.1	Wheat	cytosol	23.22	39.2
TraesCS1A01G069400.1	Wheat	peroxisome	31.28	32.51

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	InterPro:IPR024156	InterPro:P-loop_NTPase	PFAM:PF00025
PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF215	SMART:SM00175	SMART:SM00177
SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231
EnsemblPlantsGene:TraesCS5A01G467400	EnsemblPlants:TraesCS5A01G467400.1	TIGR:cd04150	:	:	:

Description

No Description!

Coordinates

chr5A:+:645260990..645263277

Molecular Weight (calculated)

24018.9 Da

IEP (calculated)

8.211

GRAVY (calculated)

-0.362

Length

211 amino acids

Sequence
(BLAST)

001: MGCRLTRGDR DSVLQERRAG RKSTYAGGEE MGLTFTKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG
101: QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TTGEGLYEGL
201: DWLSSNIASK P

Best Arabidopsis Sequence Match ( AT1G10630.1 )
(BLAST)

001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A

Arabidopsis Description

ATARFA1FADP-ribosylation factor A1F [Source:UniProtKB/TrEMBL;Acc:Q6ID97]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.