Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G019600.1 | Wheat | mitochondrion | 87.62 | 91.24 |
| TraesCS6B01G114900.2 | Wheat | mitochondrion | 87.62 | 91.24 |
| Os02t0128600-01 | Rice | mitochondrion | 81.19 | 84.54 |
| Zm00001d015121_P002 | Maize | mitochondrion | 80.69 | 84.02 |
| EES06219 | Sorghum | mitochondrion | 80.2 | 83.51 |
| HORVU6Hr1G016100.1 | Barley | cytosol, mitochondrion | 83.17 | 83.17 |
| TraesCS6A01G268000.1 | Wheat | cytosol | 66.83 | 70.68 |
| TraesCS1A01G197800.1 | Wheat | golgi | 64.36 | 68.06 |
| TraesCS3A01G337300.1 | Wheat | mitochondrion | 45.54 | 50.55 |
| TraesCS2A01G235500.1 | Wheat | golgi, plastid | 45.05 | 50.28 |
| TraesCS5A01G142100.1 | Wheat | cytosol | 44.55 | 49.72 |
| TraesCS1A01G306200.1 | Wheat | mitochondrion | 45.05 | 48.92 |
| TraesCS4A01G149200.1 | Wheat | cytosol | 40.59 | 44.57 |
| TraesCS7A01G284000.3 | Wheat | cytosol, mitochondrion | 42.57 | 43.43 |
| TraesCS5A01G467400.1 | Wheat | cytosol | 45.05 | 43.13 |
| TraesCS5A01G014900.1 | Wheat | cytosol | 33.17 | 36.22 |
| TraesCS1A01G421700.1 | Wheat | cytosol | 32.67 | 33.5 |
| TraesCS1A01G069400.1 | Wheat | peroxisome | 29.21 | 29.06 |
| TraesCS4A01G292900.1 | Wheat | cytosol | 15.84 | 25.6 |
Protein Annotations
| MapMan:22.3.2.1 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | InterPro:IPR024156 | InterPro:P-loop_NTPase | PFAM:PF00025 |
| PRINTS:PR00328 | PFscan:PS51417 | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF183 | SMART:SM00177 | SMART:SM00178 |
| SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR | TIGRFAMs:TIGR00231 | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS6A01G086900 | EnsemblPlants:TraesCS6A01G086900.2 | : | : | : | : |
Description
No Description!
Coordinates
chr6A:-:55552205..55554516
Molecular Weight (calculated)
22538.2 Da
IEP (calculated)
5.635
GRAVY (calculated)
-0.060
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVHGEGRET RRSEFLVLSG GVWCGVLVVM LGLDSAGKTT ILYRLHLGEV LQTVPTVGFN VEKVQYKNVA FTVWDVGGQE KLRQLWRMYL SNSDALIYVV
101: DSLDRERIED ARQEFQTIIR DPLMANSIIL VLANKQDLKG SMSPEEVIEG LGLHDLKNRI WHIQGTCALR GEGLYDGLDW LASTLKQLQE TGHATSIAGP
201: SI
101: DSLDRERIED ARQEFQTIIR DPLMANSIIL VLANKQDLKG SMSPEEVIEG LGLHDLKNRI WHIQGTCALR GEGLYDGLDW LASTLKQLQE TGHATSIAGP
201: SI
001: MGQTFRKLFD TFFGNQEMRV VMLGLDAAGK TTILYKLHIG EVLSTVPTIG FNVEKVQYKN VIFTVWDVGG QEKLRPLWRH YFNNTDGLIY VVDSLDRERI
101: GKAKQEFQDI IRDPFMLNSV ILVFANKQDM RGAMSPREVC EGLGLLDLKN RKWHIQGTCA LQGDGLYEGL DWLSATLKEV KAAGYSSVGP SF
101: GKAKQEFQDI IRDPFMLNSV ILVFANKQDM RGAMSPREVC EGLGLLDLKN RKWHIQGTCA LQGDGLYEGL DWLSATLKEV KAAGYSSVGP SF
Arabidopsis Description
ATARFB1CATARFB1C [Source:UniProtKB/TrEMBL;Acc:A0A178VH47]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.